RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ACOT6Q3I5F7 207 aaPredicted RBP12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 TMEM104Q8NE00 496 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 OR5D18Q8NGL1 313 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 H1FXQ92522 213 aaKnown RBP12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 SLC23A1Q9UHI7 598 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 PPP1CBP62140 327 aa12.15□□□□□ -0.47
SRGAP3-201ENST00000360413 MFAP5Q13361 173 aa12.15□□□□□ -0.47
SRGAP3-201ENST00000360413 TAZQ16635 292 aa12.15□□□□□ -0.47
SRGAP3-201ENST00000360413 PLPP7Q8NBV4 271 aa12.15□□□□□ -0.47
SRGAP3-201ENST00000360413 OR1J1Q8NGS3 322 aa12.15□□□□□ -0.47
SRGAP3-201ENST00000360413 EMCNQ9ULC0 261 aa12.15□□□□□ -0.47
SRGAP3-201ENST00000360413 ARR3P36575 388 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 NKX2-1P43699 371 aaPredicted RBP12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 VHLLQ6RSH7 139 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 AAED1Q7RTV5 226 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 THNSL2Q86YJ6 484 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 OR2T6Q8NHC8 308 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 CPPED1Q9BRF8 314 aaPredicted RBP12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 RTL8AQ9BWD3 113 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 NKX2-4Q9H2Z4 354 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 TEX50A0A1B0GTY4 177 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 SOCS7O14512 581 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF93P35789 620 aaPredicted RBP12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 SLC16A13Q7RTY0 426 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 SYT9Q86SS6 491 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 MMACHCQ9Y4U1 282 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 ST8SIA3O43173 380 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 STC2O76061 302 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 F13BP05160 661 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 POU2F2P09086 479 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 MEOX1P50221 254 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF787Q6DD87 383 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 DGAT2L6Q6ZPD8 337 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 OR2A14Q96R47 310 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 AMBRA1Q9C0C7 1298 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 GPR31O00270 319 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 EDARADDQ8WWZ3 215 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 NOL4LQ96MY1 436 aaPredicted RBP12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 UBQLN3Q9H347 655 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 RNF167Q9H6Y7 350 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 CHRM2P08172 466 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 NAT2P11245 290 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF66Q6ZN08 573 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 AAMDCQ9H7C9 122 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 HSFX1Q9UBD0 423 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 RAB27BO00194 218 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 CD37P11049 281 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 ADRA2CP18825 462 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 OR1D4P47884 311 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 N4BP2Q86UW6 1770 aaPredicted RBP12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 VAMP5O95183 116 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 GPR75O95800 540 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 RPA2P15927 270 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF25P17030 456 aaPredicted RBP12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 MFSD9Q8NBP5 474 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 OR5AR1Q8NGP9 310 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 PHOSPHO2Q8TCD6 241 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 ZIC5Q96T25 663 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 RHOFQ9HBH0 211 aa12.14□□□□□ -0.47
SRGAP3-201ENST00000360413 MRC1P22897 1456 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 SH2D1BO14796 132 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 SLC35D3Q5M8T2 416 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 WDR74Q6RFH5 385 aaPredicted RBP12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 OR6S1Q8NH40 331 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 USP22Q9UPT9 525 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 FAM24AA6NFZ4 105 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 DOK2O60496 412 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 ZNF85Q03923 595 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 OR52I2Q8NH67 350 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 APOOQ9BUR5 198 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 RNF39Q9H2S5 420 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 SIRT3Q9NTG7 399 aaPredicted RBP12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 GPR55Q9Y2T6 319 aaPredicted RBP12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 ANKRD61A6NGH8 418 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 RPLP1P05386 114 aaKnown RBP12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 SAXO2Q658L1 398 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 NPWQ8N729 165 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 EMG1Q92979 244 aaKnown RBP12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 IGSF8Q969P0 613 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 CMBLQ96DG6 245 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 ACTR3CQ9C0K3 210 aaPredicted RBP12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 PISDQ9UG56 409 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 OR5V1Q9UGF6 321 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 SULT1A3P0DMM9 295 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 SULT1A4P0DMN0 295 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 CYB561P49447 251 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 ZC3H3Q8IXZ2 948 aaKnown RBP12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 OR13C5Q8NGS8 318 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 OBP2AQ9NY56 170 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 LAMB1P07942 1786 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 A0A1W2PNV4 684 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 H3BNC9 293 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 TMEM127O75204 238 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 HSBP1O75506 76 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 TGM1P22735 817 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 CCR7P32248 378 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 SULT1A2P50226 295 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 ALKBH1Q13686 389 aaKnown RBP12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 SMUG1Q53HV7 270 aa12.13□□□□□ -0.47
SRGAP3-201ENST00000360413 Q6ZN92 141 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms