RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 GCSHP23434 173 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 EMC4Q5J8M3 183 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 LCN15Q6UWW0 184 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 AAED1Q7RTV5 226 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 DEFB132Q7Z7B7 95 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 MFSD4AQ8N468 514 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 L3MBTL4Q8NA19 623 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF680Q8NEM1 530 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 ZMAT3Q9HA38 289 aaKnown RBP8.54□□□□□ -1.04
VPS13A-203ENST00000360280 C9orf152Q5JTZ5 239 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 SPRED1Q7Z699 444 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 CHST11Q9NPF2 352 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 OR51H1Q8NH63 302 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 OR10C1Q96KK4 312 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 A0A0A6YYC8 382 aaPredicted RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 A6NDN8 102 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 I3L1I5 382 aaPredicted RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 SH2D1BO14796 132 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 NDUFB7P17568 137 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 TCN2P20062 427 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 DRD1P21728 446 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 PIPP12273 146 aaPredicted RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF542PQ5EBM4 170 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 LSRQ86X29 649 aaPredicted RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 OR52E1Q8NGJ3 308 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 BCL2L11O43521 198 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 OLIG1Q8TAK6 271 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 EXTL1Q92935 676 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 KNL1Q8NG31 2342 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 HEPACAM2A8MVW5 462 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 OR5AL1P0C617 328 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 EDDM3AQ14507 147 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 RNASEKQ6P5S7 137 aaKnown RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 NAA50Q9GZZ1 169 aaKnown RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 TMEM38AQ9H6F2 299 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 SNED1Q8TER0 1413 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 RP1L1Q8IWN7 2480 aaPredicted RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 IGKV6D-41A0A0C4DH26 115 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 C5orf52A6NGY3 159 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 A6NL46 340 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 M0QZ24 198 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 CCSO14618 274 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 BCAT2O15382 392 aaPredicted RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 TOX3O15405 576 aaPredicted RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 TMEM127O75204 238 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 ACKR1Q16570 336 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 K7ERU9 68 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 AIFM1O95831 613 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 OR8G1Q15617 311 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 DHRS7BQ6IAN0 325 aaPredicted RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 OR5M10Q6IEU7 315 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 TAAR6Q96RI8 345 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF2Q9BSG1 426 aaPredicted RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 SPNS1Q9H2V7 528 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 OR1A1Q9P1Q5 309 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 SLC25A4P12235 298 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 ETFDHQ16134 617 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 BTNL3Q6UXE8 466 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF429Q86V71 674 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 KCNE4Q8WWG9 221 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 FAM3CQ92520 227 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 DUS4LO95620 317 aaKnown RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 CCL5P13501 91 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 CPEP16870 476 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 CADM3Q8N126 398 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 SLC23A1Q9UHI7 598 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 SCGB1A1P11684 91 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 EGR3Q06889 387 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 STARD5Q9NSY2 213 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 FOXK2Q01167 660 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 RUNX3Q13761 415 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 C9orf135Q5VTT2 229 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 TBPL2Q6SJ96 375 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 ATG101Q9BSB4 218 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 SORBS1Q9BX66 1292 aaKnown RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 TMEM231Q9H6L2 316 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 LMAN1LQ9HAT1 526 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 A0A1B0GTW7 788 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 HELTA6NFD8 242 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 PTHLHP12272 177 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 TMEM178AQ8NBL3 297 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 NDRG4Q9ULP0 352 aaKnown RBP8.53□□□□□ -1.04
VPS13A-203ENST00000360280 RP1P56715 2156 aa8.53□□□□□ -1.04
VPS13A-203ENST00000360280 MED25Q71SY5 747 aa8.52□□□□□ -1.04
VPS13A-203ENST00000360280 SLC38A9Q8NBW4 561 aa8.52□□□□□ -1.04
VPS13A-203ENST00000360280 TXLNGYQ9BZA5 131 aa8.52□□□□□ -1.04
VPS13A-203ENST00000360280 ARAP2Q8WZ64 1704 aa8.52□□□□□ -1.04
VPS13A-203ENST00000360280 PRSS38A1L453 326 aa8.52□□□□□ -1.04
VPS13A-203ENST00000360280 SYPL1Q16563 259 aa8.52□□□□□ -1.04
VPS13A-203ENST00000360280 DCAF12Q5T6F0 453 aa8.52□□□□□ -1.04
VPS13A-203ENST00000360280 GGNBP1Q5YKI7 109 aa8.52□□□□□ -1.04
VPS13A-203ENST00000360280 LCORQ96JN0 433 aaPredicted RBP8.52□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF140P52738 457 aaPredicted RBP8.52□□□□□ -1.05
VPS13A-203ENST00000360280 FDX2Q6P4F2 183 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 ABI3BPQ7Z7G0 1075 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 FYTTD1Q96QD9 318 aaKnown RBP8.52□□□□□ -1.05
VPS13A-203ENST00000360280 H7C1C5 153 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 JUNBP17275 347 aaPredicted RBP8.52□□□□□ -1.05
VPS13A-203ENST00000360280 ADRA1AP35348 466 aa8.52□□□□□ -1.05
VPS13A-203ENST00000360280 RANBP10Q6VN20 620 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms