RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MS4A6EQ96DS6 147 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 SLC23A1Q9UHI7 598 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 ARL2-SNX15V9GYD0 113 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 FAM157BP0CG42 384 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 GLB1P16278 677 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 ZNF85Q03923 595 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 KIAA0141Q14154 515 aaPredicted RBP16.78■□□□□ 0.28
SHANK1-202ENST00000359082 BTNL8Q6UX41 500 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 SLC25A46Q96AG3 418 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 ARSGQ96EG1 525 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 SLC25A21Q9BQT8 299 aaPredicted RBP16.78■□□□□ 0.28
SHANK1-202ENST00000359082 FAM221AA4D161 298 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 ICOSLGO75144 302 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 ADH4P08319 380 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 TBXA2RP21731 343 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 RTL8BQ17RB0 113 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 PLXDC2Q6UX71 529 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 OR1N1Q8NGS0 311 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 MBOAT4Q96T53 435 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 ARPC3O15145 178 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 DTYMKP23919 212 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 CDC20BQ86Y33 519 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 WFDC8Q8IUA0 241 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 CRLF2Q9HC73 371 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 TBC1D29Q9UFV1 150 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 OR5G3P0C626 314 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 DUSP2Q05923 314 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 ACKR1Q16570 336 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 TMEM123Q8N131 208 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 TIMM10BQ9Y5J6 103 aa16.77■□□□□ 0.28
SHANK1-202ENST00000359082 PTRH1Q86Y79 214 aaKnown RBP16.77■□□□□ 0.27
SHANK1-202ENST00000359082 SLC7A6Q92536 515 aa16.77■□□□□ 0.27
SHANK1-202ENST00000359082 SLCO4A1Q96BD0 722 aa16.77■□□□□ 0.27
SHANK1-202ENST00000359082 C8orf44Q96CB5 159 aa16.77■□□□□ 0.27
SHANK1-202ENST00000359082 FBXL4Q9UKA2 621 aa16.77■□□□□ 0.27
SHANK1-202ENST00000359082 DCTN6O00399 190 aa16.77■□□□□ 0.27
SHANK1-202ENST00000359082 CD276Q5ZPR3 534 aa16.77■□□□□ 0.27
SHANK1-202ENST00000359082 SYT14P1Q58G82 188 aa16.77■□□□□ 0.27
SHANK1-202ENST00000359082 TMEM207Q6UWW9 146 aa16.77■□□□□ 0.27
SHANK1-202ENST00000359082 Q6ZNX1 250 aa16.77■□□□□ 0.27
SHANK1-202ENST00000359082 SLC17A4Q9Y2C5 497 aa16.77■□□□□ 0.27
SHANK1-202ENST00000359082 FLVCR1Q9Y5Y0 555 aa16.77■□□□□ 0.27
SHANK1-202ENST00000359082 KIR2DS1A0A191URI9 304 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 ACOT8O14734 319 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 CT45A10P0DMU9 189 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 KIR2DS4P43632 304 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 KIR2DS1Q14954 304 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 METRNLQ641Q3 311 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 OR10G3Q8NGC4 313 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 OR10Z1Q8NGY1 313 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 EDEM2Q9BV94 578 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 PLA2G12AQ9BZM1 189 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 WSB2Q9NYS7 404 aaPredicted RBP16.76■□□□□ 0.27
SHANK1-202ENST00000359082 ANKRD61A6NGH8 418 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 ZNF90Q03938 601 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 ELAVL1Q15717 326 aaKnown RBP16.76■□□□□ 0.27
SHANK1-202ENST00000359082 FAAP20Q6NZ36 180 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 TMEM231Q9H6L2 316 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 PROCRQ9UNN8 238 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 RGPD5Q99666 1765 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 RPS19BP1Q86WX3 136 aaKnown RBP16.76■□□□□ 0.27
SHANK1-202ENST00000359082 OR6C68A6NDL8 312 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 RPS23P62266 143 aaKnown RBP16.76■□□□□ 0.27
SHANK1-202ENST00000359082 FAM122BQ7Z309 247 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 GOLGA4Q13439 2230 aaKnown RBP16.76■□□□□ 0.27
SHANK1-202ENST00000359082 VWA2Q5GFL6 755 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 LAIR1Q6GTX8 287 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 TRILQ7L0X0 811 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 OR13C5Q8NGS8 318 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 SPACA5Q96QH8 159 aa16.76■□□□□ 0.27
SHANK1-202ENST00000359082 NTF3P20783 257 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 DGCR2P98153 550 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 ZNF239Q16600 458 aaKnown RBP16.75■□□□□ 0.27
SHANK1-202ENST00000359082 LCN15Q6UWW0 184 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 SLC25A43Q8WUT9 341 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-202ENST00000359082 NDRG4Q9ULP0 352 aaKnown RBP16.75■□□□□ 0.27
SHANK1-202ENST00000359082 GPR37O15354 613 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 OPALINQ96PE5 141 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 FBXO8Q9NRD0 319 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 PRKNO60260 465 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-202ENST00000359082 OR2J2O76002 312 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 ARR3P36575 388 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 RPS16P62249 146 aaKnown RBP16.75■□□□□ 0.27
SHANK1-202ENST00000359082 DOC2BQ14184 412 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 LIPNQ5VXI9 398 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 PHYHIPQ92561 330 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 SLC22A11Q9NSA0 550 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 A0A0A6YYJ9 748 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 SDCBPO00560 298 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-202ENST00000359082 FAM26DQ5JW98 314 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 SYT6Q5T7P8 510 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-202ENST00000359082 OTPQ5XKR4 325 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 TMEM81Q6P7N7 255 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 KLHDC8BQ8IXV7 354 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 DDOQ99489 341 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 ASH2LQ9UBL3 628 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 GOLT1BQ9Y3E0 138 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 CHRM2P08172 466 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 CPEP16870 476 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 RAB35Q15286 201 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms