RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ERVMER34-1Q9H9K5 563 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 PURGQ9UJV8 347 aaKnown RBP12.47□□□□□ -0.41
VCP-201ENST00000358901 OIP5O43482 229 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 QDPRP09417 244 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 OR4E1P0C645 316 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 MSL3P1P0C860 447 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 ICAM2P13598 275 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 PSMB6P28072 239 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 MMP15P51511 669 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 GPR85P60893 370 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 GRB2P62993 217 aaKnown RBP12.47□□□□□ -0.41
VCP-201ENST00000358901 EGR3Q06889 387 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 ADAM5Q6NVV9 412 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 WDR88Q6ZMY6 472 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 TMPRSS11FQ6ZWK6 438 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 LGI3Q8N145 548 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 CALHM2Q9HA72 323 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 SLC5A6Q9Y289 635 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 SNRPGP15A8MWD9 76 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 NRG2O14511 850 aaPredicted RBP12.46□□□□□ -0.41
VCP-201ENST00000358901 PLRG1O43660 514 aaKnown RBP12.46□□□□□ -0.41
VCP-201ENST00000358901 MSR1P21757 451 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 ENPP1P22413 925 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 PCBP4P57723 403 aaKnown RBP12.46□□□□□ -0.41
VCP-201ENST00000358901 SNRPNP63162 240 aaKnown RBP12.46□□□□□ -0.41
VCP-201ENST00000358901 FAM74A1Q5RGS3 127 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 DOK3Q7L591 496 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 RPS19BP1Q86WX3 136 aaKnown RBP12.46□□□□□ -0.41
VCP-201ENST00000358901 SLC25A43Q8WUT9 341 aaPredicted RBP12.46□□□□□ -0.41
VCP-201ENST00000358901 GPR84Q9NQS5 396 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 HOXB3P14651 431 aaPredicted RBP12.46□□□□□ -0.41
VCP-201ENST00000358901 ZNF74Q16587 644 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 ZBTB37Q5TC79 503 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 OR2L13Q8N349 312 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 BHLHE23Q8NDY6 225 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 FGF14Q92915 247 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 SEH1LQ96EE3 360 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 MRGPRX3Q96LB0 322 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 FBXL4Q9UKA2 621 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 HRH3Q9Y5N1 445 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 CEP250Q9BV73 2442 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 TRPM6Q9BX84 2022 aa12.46□□□□□ -0.41
VCP-201ENST00000358901 TBX19O60806 448 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 SHHQ15465 462 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 PDLIM3Q53GG5 364 aaPredicted RBP12.46□□□□□ -0.42
VCP-201ENST00000358901 OR52N5Q8NH56 324 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 C8orf44Q96CB5 159 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 TXNIPQ9H3M7 391 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 TAF9BQ9HBM6 251 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 CTSFQ9UBX1 484 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 ZNF629Q9UEG4 869 aaPredicted RBP12.46□□□□□ -0.42
VCP-201ENST00000358901 ASXL3Q9C0F0 2248 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 PAPPAQ13219 1627 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 CXorf51AA0A1B0GTR3 108 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 TTLL8A6PVC2 850 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 OPRM1P35372 400 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 TAS2R30P59541 319 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 SRPXP78539 464 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 GUCA2AQ02747 115 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 FAM53BQ14153 422 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 MLF2Q15773 248 aaPredicted RBP12.46□□□□□ -0.42
VCP-201ENST00000358901 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 KIAA1958Q8N8K9 716 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 NRTNQ99748 197 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 PIGQQ9BRB3 760 aa12.46□□□□□ -0.42
VCP-201ENST00000358901 SPTBP11277 2137 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 PYCARD-AS1I3L0S3 204 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 CTSVO60911 334 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 CD63P08962 238 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 CD80P33681 288 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 CAPZBP47756 277 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 ZNF266Q14584 549 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 MAML2Q8IZL2 1156 aaPredicted RBP12.45□□□□□ -0.42
VCP-201ENST00000358901 OR51A4Q8NGJ6 313 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 OR8D4Q8NGM9 314 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 SMCO4Q9NRQ5 59 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 PLSCR5A0PG75 271 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 EDN3P14138 238 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 HOXC8P31273 242 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 PCK2Q16822 640 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 TOR2AQ5JU69 321 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 GRAMD2AQ8IUY3 354 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 MARCH1Q8TCQ1 289 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 EDAQ92838 391 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 WDR34Q96EX3 536 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 GPR173Q9NS66 373 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 SLC23A1Q9UHI7 598 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 B9D1Q9UPM9 204 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 A0A087WUJ7 227 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 SERTM1A2A2V5 107 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 LGALS8O00214 317 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 NXPH3O95157 252 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 ZFPL1O95159 310 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 PDZK1IP1Q13113 114 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 CST9LP1Q5W188 147 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 TEX261Q6UWH6 196 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 THSD4Q6ZMP0 1018 aa12.45□□□□□ -0.42
VCP-201ENST00000358901 KIAA0907Q7Z7F0 614 aaPredicted RBP12.45□□□□□ -0.42
VCP-201ENST00000358901 NKX3-1Q99801 234 aaPredicted RBP12.45□□□□□ -0.42
VCP-201ENST00000358901 C20orf24Q9BUV8 137 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms