RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 TRIM61Q5EBN2 209 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 PRAMEF5Q5TYX0 476 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 PRAMEF6Q5VXH4 476 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 SCD5Q86SK9 330 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 PLPP7Q8NBV4 271 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 FOXN4Q96NZ1 517 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 SLC46A2Q9BY10 475 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 TRAPPC1Q9Y5R8 145 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 SERTM2A0A1B0GWG4 89 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 FABP4P15090 132 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 ZNF154Q13106 437 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 EXT1Q16394 746 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 ABLIM2Q6H8Q1 611 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 LRRC15Q8TF66 581 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 MBOAT4Q96T53 435 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 SYT11Q9BT88 431 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 DUSP21Q9H596 190 aa11.77□□□□□ -0.53
SMC4-202ENST00000357388 ZNF816-ZNF321PA0A0X1KG74 233 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 EDN1P05305 212 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 CST2P09228 141 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 ALOX5APP20292 161 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 PCBP4P57723 403 aaKnown RBP11.76□□□□□ -0.53
SMC4-202ENST00000357388 MPPED2Q15777 294 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 CLPPQ16740 277 aaPredicted RBP11.76□□□□□ -0.53
SMC4-202ENST00000357388 DHRS11Q6UWP2 260 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 FA2HQ7L5A8 372 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 LRRC18Q8N456 261 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 ZNF321PQ8N8H1 164 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 PPP6CO00743 305 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 LY86O95711 162 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 ZP2Q05996 745 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 PJVKQ0ZLH3 352 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 OR8B8Q15620 311 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 ZNF687Q8N1G0 1237 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 OR10D4PQ8NGN7 298 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 STACQ99469 402 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 ZNF2Q9BSG1 426 aaPredicted RBP11.76□□□□□ -0.53
SMC4-202ENST00000357388 RIMS4Q9H426 269 aaPredicted RBP11.76□□□□□ -0.53
SMC4-202ENST00000357388 CXXC1Q9P0U4 656 aaPredicted RBP11.76□□□□□ -0.53
SMC4-202ENST00000357388 HCFC2Q9Y5Z7 792 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 CICQ96RK0 1608 aaPredicted RBP11.76□□□□□ -0.53
SMC4-202ENST00000357388 LMO7Q8WWI1 1683 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 COL14A1Q05707 1796 aaKnown RBP11.76□□□□□ -0.53
SMC4-202ENST00000357388 H0YGG7 62 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 GPX5O75715 221 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 CTSLP07711 333 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 CSF2RBP32927 897 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 GPR85P60893 370 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 LRRTM3Q86VH5 581 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 OR5K2Q8NHB8 316 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 IP6K3Q96PC2 410 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 SUCNR1Q9BXA5 334 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 PRSS21Q9Y6M0 314 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 DEGS1O15121 323 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 SMIM6P0DI80 62 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 DEFA4P12838 97 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 F2RP25116 425 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 SDHAP31040 664 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 CNN1P51911 297 aaKnown RBP11.76□□□□□ -0.53
SMC4-202ENST00000357388 CARD18P57730 90 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 DEFB103AP81534 67 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 TOMM34Q15785 309 aaPredicted RBP11.76□□□□□ -0.53
SMC4-202ENST00000357388 ETFDHQ16134 617 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 GGNBP1Q5YKI7 109 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 FBXW5Q969U6 566 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 OR6C1Q96RD1 312 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 SPOCK3Q9BQ16 436 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 FAM234AQ9H0X4 552 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 SMAD6O43541 496 aaKnown RBP11.76□□□□□ -0.53
SMC4-202ENST00000357388 PVRP15151 417 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 ZNF528Q3MIS6 628 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 C9orf135Q5VTT2 229 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 TMEM88Q6PEY1 159 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 DGAT2L6Q6ZPD8 337 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 RELL2Q8NC24 303 aaPredicted RBP11.76□□□□□ -0.53
SMC4-202ENST00000357388 TMEM255BQ8WV15 326 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 LIPHQ8WWY8 451 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 CHST8Q9H2A9 424 aa11.76□□□□□ -0.53
SMC4-202ENST00000357388 CST5P28325 142 aaPredicted RBP11.75□□□□□ -0.53
SMC4-202ENST00000357388 PLAC9Q5JTB6 97 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 OR5D18Q8NGL1 313 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 ARRDC2Q8TBH0 407 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 TMEM40Q8WWA1 233 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 SLC39A7Q92504 469 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 HSD17B8Q92506 261 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 AKR1E2Q96JD6 320 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 PARP12Q9H0J9 701 aaKnown RBP11.75□□□□□ -0.53
SMC4-202ENST00000357388 ADAM11O75078 769 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 ZNF429Q86V71 674 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 TTC9BQ8N6N2 239 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 OR6S1Q8NH40 331 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 H1FXQ92522 213 aaKnown RBP11.75□□□□□ -0.53
SMC4-202ENST00000357388 TEAD3Q99594 435 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 C20orf27Q9GZN8 174 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 SLC25A19Q9HC21 320 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 CLDN34H7C241 214 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 PRRG2O14669 202 aa11.75□□□□□ -0.53
SMC4-202ENST00000357388 CSNK1EP49674 416 aaKnown RBP11.75□□□□□ -0.53
SMC4-202ENST00000357388 EGR3Q06889 387 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms