RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 NKAPLQ5M9Q1 402 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 EEF1A1P5Q5VTE0 462 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 RBMS3Q6XE24 437 aaKnown RBP9.11□□□□□ -0.95
PTPRA-203ENST00000356147 RAB11FIP2Q7L804 512 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 PRSS58Q8IYP2 241 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 OR5AP2Q8NGF4 316 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 OR13C3Q8NGS6 347 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 MARCH1Q8TCQ1 289 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 METTL21AQ8WXB1 218 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 HERVK_113Q902F9 699 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 BMFQ96LC9 184 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 OR8B4Q96RC9 309 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 SLC25A21Q9BQT8 299 aaPredicted RBP9.11□□□□□ -0.95
PTPRA-203ENST00000356147 CENPMQ9NSP4 180 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 NDRG3Q9UGV2 375 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 MUC22E2RYF6 1773 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-203ENST00000356147 C9orf170A2RU37 121 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 P2RY10O00398 339 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 TO15178 435 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 HCRTR2O43614 444 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 STK17BO94768 372 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 TIMP1P01033 207 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 ASAH2BP0C7U1 165 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 ZBTB25P24278 435 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 ZP2Q05996 745 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 PDZK1IP1Q13113 114 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 WBP2NLQ6ICG8 309 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 SLC29A4Q7RTT9 530 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 TMEM229BQ8NBD8 167 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 OR11A1Q9GZK7 315 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 OR8D2Q9GZM6 311 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 IGFLR1Q9H665 355 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 IFT22Q9H7X7 185 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 POLE3Q9NRF9 147 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 PRTFDC1Q9NRG1 225 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 CKLFQ9UBR5 152 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 CTSFQ9UBX1 484 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 EDARQ9UNE0 448 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 CEP290O15078 2479 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 TNFSF14O43557 240 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 APODP05090 189 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 GNALP38405 381 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 FMODQ06828 376 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 AIMP2Q13155 320 aaKnown RBP9.1□□□□□ -0.95
PTPRA-203ENST00000356147 ACKR1Q16570 336 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 ZNF528Q3MIS6 628 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 CCDC157Q569K6 752 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 TMEM196Q5HYL7 178 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 LYG2Q86SG7 212 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 OR5T2Q8NGG2 359 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 FOXRED1Q96CU9 486 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-203ENST00000356147 GPX7Q96SL4 187 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-203ENST00000356147 G6PC3Q9BUM1 346 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 ABHD6Q9BV23 337 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 ALX4Q9H161 411 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-203ENST00000356147 NXF5Q9H1B4 397 aaKnown RBP9.1□□□□□ -0.95
PTPRA-203ENST00000356147 FN3KRPQ9HA64 309 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 CHMP1AQ9HD42 196 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-203ENST00000356147 PNO1Q9NRX1 252 aaKnown RBP9.1□□□□□ -0.95
PTPRA-203ENST00000356147 COA4Q9NYJ1 87 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 LRP12Q9Y561 859 aa9.1□□□□□ -0.95
PTPRA-203ENST00000356147 H0YIG0 161 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 H0YIZ8 118 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 HLA-DOBP13765 273 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 GPR3P46089 330 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 HOXA1P49639 335 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 SNRPEP62304 92 aaKnown RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 INSM1Q01101 510 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 ALG11Q2TAA5 492 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 PTCRAQ6ISU1 281 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 FAM166AQ6J272 317 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 YAF2Q8IY57 180 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 OR4K17Q8NGC6 315 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 GPR119Q8TDV5 335 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 SLC37A2Q8TED4 501 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 WDR92Q96MX6 357 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 NUDT9Q9BW91 350 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 COA3Q9Y2R0 106 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 YBX2Q9Y2T7 364 aaKnown RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 TMEM184BQ9Y519 407 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 PTPRSQ13332 1948 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 C2orf72A6NCS6 295 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 C2orf74A8MZ97 194 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 PLRG1O43660 514 aaKnown RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 FKTNO75072 461 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 CD2P06729 351 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 IL11P20809 199 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 NPY4RP50391 375 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 FOXL2P58012 376 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 EGR3Q06889 387 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 TDGQ13569 410 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 ADGRE4PQ86SQ3 457 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 CCDC36Q8IYA8 594 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 ZNF679Q8IYX0 411 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 SPAG16Q8N0X2 631 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 ZSCAN4Q8NAM6 433 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 MMABQ96EY8 250 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 PTGES2Q9H7Z7 377 aa9.09□□□□□ -0.95
PTPRA-203ENST00000356147 PRMT8Q9NR22 394 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-203ENST00000356147 LOC107986453A0A1B0GWG9 222 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms