RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ZANQ9Y493 2812 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 A0A1W2PPR1 153 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 A0A1W2PRG6 482 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 CCDC182A6NF36 153 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 TUBAL3A6NHL2 446 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 FAM166BA8MTA8 275 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 H3BSA7 217 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 M0R129 80 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 PLPP3O14495 311 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 SMPD2O60906 423 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 GLCEO94923 617 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 OR6A2O95222 327 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 RENP00797 406 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 IGHG3P01860 377 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 HRGP04196 525 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 SBK2P0C263 348 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 LIMS3P0CW19 117 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 LIMS4P0CW20 117 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 CCL3P10147 92 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 HIST1H1CP16403 213 aaKnown RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 CPEP16870 476 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 DPP4P27487 766 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 CRABP1P29762 137 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 GRPRP30550 384 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 GABRA5P31644 462 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 UGT2B10P36537 528 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 TGFBR2P37173 567 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 RPS5P46782 204 aaKnown RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 SERPINB10P48595 397 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 RPL27P61353 136 aaKnown RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 PPIAP62937 165 aaKnown RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 CSNK2A1P68400 391 aaPredicted RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 SLC35A1P78382 337 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 SORDQ00796 357 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 KRR1Q13601 381 aaKnown RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 CRMP1Q14194 572 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 GALEQ14376 348 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 TOMM34Q15785 309 aaPredicted RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 CCDC58Q4VC31 144 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 GPR107Q5VW38 600 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 TMEM200BQ69YZ2 307 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 DNM1P34Q6PK57 102 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 PAQR6Q6TCH4 344 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 IL20RBQ6UXL0 311 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 SLC16A12Q6ZSM3 486 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 KCTD20Q7Z5Y7 419 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 ZBTB46Q86UZ6 589 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 OR14K1Q8NGZ2 314 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF519Q8TB69 540 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 ZFAND2BQ8WV99 257 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 SGCDQ92629 289 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 THRSPQ92748 146 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 PTP4A1Q93096 173 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 TMIGD2Q96BF3 282 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 C12orf43Q96C57 262 aaKnown RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 NMD3Q96D46 503 aaKnown RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 ADAD1Q96M93 576 aaKnown RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 TEAD3Q99594 435 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 FAM173AQ9BQD7 235 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 RHNO1Q9BSD3 238 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 ALG12Q9BV10 488 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 SF3B5Q9BWJ5 86 aaKnown RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 MARCH7Q9H992 704 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 LIN28AQ9H9Z2 209 aaKnown RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 PROK2Q9HC23 129 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 AMBNQ9NP70 447 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 TRIM36Q9NQ86 728 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 DEPPQ9NTK1 212 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 PAQR5Q9NXK6 330 aaPredicted RBP6.13□□□□□ -1.43
VPS13A-201ENST00000355766 TAS2R5Q9NYW4 299 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 DKKL1Q9UK85 242 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 RASD1Q9Y272 281 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 GPR52Q9Y2T5 361 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 IER3IP1Q9Y5U9 82 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 TMEM14AQ9Y6G1 99 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 GTF3C1Q12789 2109 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 TLN2Q9Y4G6 2542 aa6.13□□□□□ -1.43
VPS13A-201ENST00000355766 TEX13CA0A0J9YWL9 993 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 A0A1B0GVC2 190 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 PRSS37A4D1T9 235 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 PINLYPA6NC86 204 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 AQP7P3A6NL99 342 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 B4DXG7 233 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 BLOC1S5-TXNDC5H3BN57 136 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 DVL2O14641 736 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 AIREO43918 545 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 TMEM127O75204 238 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 SULT1C4O75897 302 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 IFNA2P01563 188 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 MT-ND5P03915 603 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 LCKP06239 509 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 CD36P16671 472 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 SPI1P17947 270 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 CNR1P21554 472 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 BMP5P22003 454 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 ATP6V1E1P36543 226 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 AQP2P41181 271 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 MAP2K4P45985 399 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 CTXN1P60606 82 aa6.12□□□□□ -1.43
VPS13A-201ENST00000355766 H3F3AP84243 136 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms