RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ACTR10Q9NZ32 417 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 STUB1Q9UNE7 303 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 IFITM5A6NNB3 132 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ZNF727A8MUV8 499 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 DDAH2O95865 285 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 PTTG1O95997 202 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 CCL4P13236 92 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 PRKACBP22694 351 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 DHPSP49366 369 aaPredicted RBP4.9□□□□□ -1.62
CD47-201ENST00000355354 RAB28P51157 221 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 BRWD1-AS2P59051 145 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 PCOLCEQ15113 449 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ZNF239Q16600 458 aaKnown RBP4.9□□□□□ -1.62
CD47-201ENST00000355354 AANATQ16613 207 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ARHGAP40Q5TG30 622 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 TRAM1L1Q8N609 369 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 NAT6Q93015 286 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ZNF488Q96MN9 340 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 RAB33BQ9H082 229 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 FGF20Q9NP95 211 aaPredicted RBP4.9□□□□□ -1.62
CD47-201ENST00000355354 CYTL1Q9NRR1 136 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 MGAT4CQ9UBM8 478 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 A0A1B0GTI1 187 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 FOXE1O00358 373 aaPredicted RBP4.9□□□□□ -1.62
CD47-201ENST00000355354 BGLAPP02818 100 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 GNB3P16520 340 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 OPRM1P35372 400 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 P2RY4P51582 365 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ZNF117Q03924 483 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 TRAM2Q15035 370 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 TMEM44Q2T9K0 475 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ANKRD55Q3KP44 614 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ALG10BQ5I7T1 473 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 LRRC70Q7Z2Q7 622 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ASPGQ86U10 573 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ANGPTL5Q86XS5 388 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ZNF101Q8IZC7 436 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 PLPPR1Q8TBJ4 325 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 IFI44Q8TCB0 444 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ST7LQ8TDW4 575 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 DPEP2Q9H4A9 486 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 NRIP3Q9NQ35 241 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 ING3Q9NXR8 418 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 IKZF2Q9UKS7 526 aa4.9□□□□□ -1.62
CD47-201ENST00000355354 CENPXA8MT69 81 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 OR8U9P0C7N5 309 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 ALOX5APP20292 161 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 NT5EP21589 574 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 RPS4Y1P22090 263 aaKnown RBP4.9□□□□□ -1.63
CD47-201ENST00000355354 UBE2IP63279 158 aaKnown RBP4.9□□□□□ -1.63
CD47-201ENST00000355354 MRPS15P82914 257 aaKnown RBP4.9□□□□□ -1.63
CD47-201ENST00000355354 SORDQ00796 357 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 CHAF1BQ13112 559 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 PCGF3Q3KNV8 242 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 MANEAQ5SRI9 462 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 ATPAF1Q5TC12 328 aaPredicted RBP4.9□□□□□ -1.63
CD47-201ENST00000355354 HIST2H2BDQ6DRA6 164 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 DHRS13Q6UX07 377 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 MED25Q71SY5 747 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 TMED4Q7Z7H5 227 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 GPAT4Q86UL3 456 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 GDPD1Q8N9F7 314 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 OR8U1Q8NH10 309 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 PHOSPHO1Q8TCT1 267 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 ASB17Q8WXJ9 295 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 MCHR2Q969V1 340 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 NXPE2Q96DL1 559 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 ARPC5LQ9BPX5 153 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 NUDT9Q9BW91 350 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 WFDC1Q9HC57 220 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 FOXJ2Q9P0K8 574 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 HCN1O60741 890 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 HTR3BO95264 441 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 SERPINA5P05154 406 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 MAPK8P45983 427 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 AP1S2P56377 157 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 SLC37A1P57057 533 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 RGS8P57771 180 aaPredicted RBP4.9□□□□□ -1.63
CD47-201ENST00000355354 MAPRE2Q15555 327 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 UBE2V2Q15819 145 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 DGUOKQ16854 277 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 SNAI3Q3KNW1 292 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 GUSBP11Q6P575 273 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 SVOPLQ8N434 492 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 ACBD7Q8N6N7 88 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 GOLM1Q8NBJ4 401 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 CPT1CQ8TCG5 803 aa4.9□□□□□ -1.63
CD47-201ENST00000355354 H2AFY2Q9P0M6 372 aaPredicted RBP4.9□□□□□ -1.63
CD47-201ENST00000355354 ERRFI1Q9UJM3 462 aaPredicted RBP4.9□□□□□ -1.63
CD47-201ENST00000355354 CR1P17927 2039 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 SFTPBP07988 381 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 HIST1H2AGP0C0S8 130 aaPredicted RBP4.89□□□□□ -1.63
CD47-201ENST00000355354 OR56A5P0C7T3 313 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 HIST1H2ADP20671 130 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 LPAR6P43657 344 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 RGS4P49798 205 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 ILF3Q12906 894 aaKnown RBP eCLIP4.89□□□□□ -1.63
CD47-201ENST00000355354 PPP1R1AQ13522 171 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 C9orf135Q5VTT2 229 aa4.89□□□□□ -1.63
CD47-201ENST00000355354 CD276Q5ZPR3 534 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms