RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 SMAD5Q99717 465 aaKnown RBP15.2■□□□□ 0.02
VPS13B-201ENST00000355155 CACNA1HO95180 2353 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 OR6C65A6NJZ3 312 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 CSF3P09919 207 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 NTF4P34130 210 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 ZNF84P51523 738 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 DEFA1P59665 94 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 DEFA3P59666 94 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 PRSS45Q7RTY3 260 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 VASH2Q86V25 355 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 ABCG5Q9H222 651 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 ABCB10Q9NRK6 738 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 FBXL3Q9UKT7 428 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 HHLA2Q9UM44 414 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 SLC22A13Q9Y226 551 aa15.2■□□□□ 0.02
VPS13B-201ENST00000355155 A0A1B0GVC2 190 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 LOC390937A0A1W2PQ73 354 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 SMIM30A4D0T7 59 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 STARP49675 285 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 BAK1Q16611 211 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 TRIM16LQ309B1 348 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 C11orf91Q3C1V1 193 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 UBE2NLQ5JXB2 153 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 CARD17Q5XLA6 110 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 SNX29P2Q8IUI4 249 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 OR6N1Q8NGY5 312 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 OR10AC1Q8NH08 325 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 CHAC2Q8WUX2 184 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 TCF7L1Q9HCS4 588 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 CELA3AP09093 270 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 GJC3Q8NFK1 279 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 ABTB1Q969K4 478 aaPredicted RBP15.19■□□□□ 0.02
VPS13B-201ENST00000355155 EMC7Q9NPA0 242 aa15.19■□□□□ 0.02
VPS13B-201ENST00000355155 TMEM269A0A1B0GVZ9 245 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 EIF4EP06730 217 aaKnown RBP15.18■□□□□ 0.02
VPS13B-201ENST00000355155 PPIAP62937 165 aaKnown RBP15.18■□□□□ 0.02
VPS13B-201ENST00000355155 SLC10A1Q14973 349 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 IGFL3Q6UXB1 125 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 OR51A4Q8NGJ6 313 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 TMEM106AQ96A25 262 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 EMC9Q9Y3B6 208 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 AK6Q9Y3D8 172 aaKnown RBP15.18■□□□□ 0.02
VPS13B-201ENST00000355155 ACOT7O00154 380 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 TTRP02766 147 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 CDAP32320 146 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 EIF1AXP47813 144 aaKnown RBP15.18■□□□□ 0.02
VPS13B-201ENST00000355155 BCL2L15Q5TBC7 163 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 PYHIN1Q6K0P9 492 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 KLHL24Q6TFL4 600 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 ZNF416Q9BWM5 594 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 ULBP2Q9BZM5 246 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 TMEM38BQ9NVV0 291 aa15.18■□□□□ 0.02
VPS13B-201ENST00000355155 TRAV8-7A0A075B6U6 113 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 GSTZ1O43708 216 aaPredicted RBP15.17■□□□□ 0.02
VPS13B-201ENST00000355155 F10P00742 488 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 PLGLB1Q02325 96 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 CCDC92Q53HC0 331 aaPredicted RBP15.17■□□□□ 0.02
VPS13B-201ENST00000355155 OTPQ5XKR4 325 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 AAED1Q7RTV5 226 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.17■□□□□ 0.02
VPS13B-201ENST00000355155 CDH26Q8IXH8 852 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 PLPP7Q8NBV4 271 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 ZC3HAV1LQ96H79 300 aaKnown RBP15.17■□□□□ 0.02
VPS13B-201ENST00000355155 PBOV1Q9GZY1 135 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 SLC6A15Q9H2J7 730 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 SLC17A5Q9NRA2 495 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 DHDHQ9UQ10 334 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 RHBDD3Q9Y3P4 386 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 A0A1B0GTI1 187 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 MEGF11A6BM72 1044 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 SLC2A2P11168 524 aaPredicted RBP15.17■□□□□ 0.02
VPS13B-201ENST00000355155 ARG2P78540 354 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 SCN1BQ07699 218 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 SRSF6Q13247 344 aaKnown RBP15.17■□□□□ 0.02
VPS13B-201ENST00000355155 RNPS1Q15287 305 aaKnown RBP15.17■□□□□ 0.02
VPS13B-201ENST00000355155 CORO6Q6QEF8 472 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 ROBO4Q8WZ75 1007 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 SLC39A7Q92504 469 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 EMC3Q9P0I2 261 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 ATPIF1Q9UII2 106 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 CAMK2AQ9UQM7 478 aa15.17■□□□□ 0.02
VPS13B-201ENST00000355155 PHF3Q92576 2039 aaKnown RBP15.17■□□□□ 0.02
VPS13B-201ENST00000355155 ACSM4P0C7M7 580 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 FDCSPQ8NFU4 85 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 OR4M1Q8NGD0 313 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 OR5H6Q8NGV6 325 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 SEC61A2Q9H9S3 476 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 ZNF175Q9Y473 711 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 TNRC6AQ8NDV7 1962 aaKnown RBP15.16■□□□□ 0.02
VPS13B-201ENST00000355155 LOC107986453A0A1B0GWG9 222 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 DNM1P46Q6ZS02 220 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.16■□□□□ 0.02
VPS13B-201ENST00000355155 ADGRE4PQ86SQ3 457 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 RDH10Q8IZV5 341 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 RAB40AQ8WXH6 277 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 WDYHV1Q96HA8 205 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 ZNF845Q96IR2 970 aaPredicted RBP15.16■□□□□ 0.02
VPS13B-201ENST00000355155 ASH2LQ9UBL3 628 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 EXTL2Q9UBQ6 330 aa15.16■□□□□ 0.02
VPS13B-201ENST00000355155 A0A1W2PPK0 400 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms