RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 IGHV3-9P01782 118 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 ACSM4P0C7M7 580 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 CFL1P23528 166 aaKnown RBP12.42□□□□□ -0.42
TRIM4-201ENST00000349062 DPP4P27487 766 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 RBMS1P29558 406 aaKnown RBP12.42□□□□□ -0.42
TRIM4-201ENST00000349062 SLC6A9P48067 706 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 CLDN17P56750 224 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 UBE2MP61081 183 aaKnown RBP12.42□□□□□ -0.42
TRIM4-201ENST00000349062 OPCMLQ14982 345 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 KCTD18Q6PI47 426 aaPredicted RBP12.42□□□□□ -0.42
TRIM4-201ENST00000349062 TRILQ7L0X0 811 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 SORCS2Q96PQ0 1159 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 UCN2Q96RP3 112 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 SOSTQ9BQB4 213 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 FXYD6Q9H0Q3 95 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 PTGES2Q9H7Z7 377 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 EVA1AQ9H8M9 152 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 HEXA-AS1Q9H8Q6 139 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 CHST11Q9NPF2 352 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 DLL4Q9NR61 685 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 KLHL9Q9P2J3 617 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 MYO7BQ6PIF6 2116 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 ZNF726A6NNF4 738 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 PDCD5O14737 125 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 GPRIN2O60269 458 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 SC5DO75845 299 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 SRYQ05066 204 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 STK11Q15831 433 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 MAML2Q8IZL2 1156 aaPredicted RBP12.42□□□□□ -0.42
TRIM4-201ENST00000349062 EXD3Q8N9H8 876 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 CXorf58Q96LI9 332 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 GINS4Q9BRT9 223 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 HPF1Q9NWY4 346 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 ASH2LQ9UBL3 628 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 DKKL1Q9UK85 242 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 NUBP2Q9Y5Y2 271 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 SESN1Q9Y6P5 492 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 CER1O95813 267 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 HLA-DQB1P01920 261 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 IFI6P09912 130 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 LIPCP11150 499 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 DEFA5Q01523 94 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 GLYATL3Q5SZD4 288 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 TMEM205Q6UW68 189 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 C17orf107Q6ZR85 190 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 Q6ZTK2 550 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 FGD2Q7Z6J4 655 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 CHST4Q8NCG5 386 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 OR6M1Q8NGM8 313 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 YIPF5Q969M3 257 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 SCMH1Q96GD3 660 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 C4orf45Q96LM5 186 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 OR8B4Q96RC9 309 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 RBM24Q9BX46 236 aaKnown RBP12.41□□□□□ -0.42
TRIM4-201ENST00000349062 SDHAF2Q9NX18 166 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 DMXL1Q9Y485 3027 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 A0A1W2PQD3 144 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 ART1P52961 327 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 NLRC3Q7RTR2 1065 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 ZNF679Q8IYX0 411 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 C11orf40Q8WZ69 217 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 OR2M2Q96R28 347 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 SOX7Q9BT81 388 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 PPA2Q9H2U2 334 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 SAV1Q9H4B6 383 aaPredicted RBP12.41□□□□□ -0.42
TRIM4-201ENST00000349062 VSX1Q9NZR4 365 aaPredicted RBP12.41□□□□□ -0.42
TRIM4-201ENST00000349062 HS3ST3B1Q9Y662 390 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 DSPP15924 2871 aaKnown RBP12.41□□□□□ -0.42
TRIM4-201ENST00000349062 F5H5K5 113 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 RER1O15258 196 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 DXOO77932 396 aaKnown RBP12.41□□□□□ -0.42
TRIM4-201ENST00000349062 STK17BO94768 372 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 ICAM2P13598 275 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 BTCP35070 178 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 FOLR3P41439 243 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 POU3F4P49335 361 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 IL10RAQ13651 578 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 TMEM255AQ5JRV8 349 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 C9orf135Q5VTT2 229 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 FAM122CQ6P4D5 195 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 C11orf88Q6PI97 169 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 RPS19BP1Q86WX3 136 aaKnown RBP12.41□□□□□ -0.42
TRIM4-201ENST00000349062 OR5D18Q8NGL1 313 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 FGGYQ96C11 551 aa12.41□□□□□ -0.42
TRIM4-201ENST00000349062 LAMA5O15230 3695 aa12.4□□□□□ -0.42
TRIM4-201ENST00000349062 AIPO00170 330 aa12.4□□□□□ -0.42
TRIM4-201ENST00000349062 UMODP07911 640 aa12.4□□□□□ -0.42
TRIM4-201ENST00000349062 HSD11B1P28845 292 aa12.4□□□□□ -0.42
TRIM4-201ENST00000349062 CRABP1P29762 137 aa12.4□□□□□ -0.42
TRIM4-201ENST00000349062 MPLP40238 635 aa12.4□□□□□ -0.42
TRIM4-201ENST00000349062 PSMA6P60900 246 aaKnown RBP12.4□□□□□ -0.42
TRIM4-201ENST00000349062 CD276Q5ZPR3 534 aa12.4□□□□□ -0.42
TRIM4-201ENST00000349062 C3P1Q6ZMU1 363 aa12.4□□□□□ -0.42
TRIM4-201ENST00000349062 SLC25A38Q96DW6 304 aa12.4□□□□□ -0.42
TRIM4-201ENST00000349062 MRPS18BQ9Y676 258 aaKnown RBP12.4□□□□□ -0.42
TRIM4-201ENST00000349062 IGLV1-36A0A0B4J1U3 117 aa12.4□□□□□ -0.42
TRIM4-201ENST00000349062 TRAV1-2A0A0B4J238 106 aa12.4□□□□□ -0.42
TRIM4-201ENST00000349062 A0A0G2JMM0 328 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms