RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ELOA3Q8NG57 546 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 NUDCD2Q8WVJ2 157 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 TSEN15Q8WW01 171 aaKnown RBP16.79■□□□□ 0.28
SCARF1-202ENST00000348987 ALPK2Q86TB3 2170 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 A6NCN8 305 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 CD80P33681 288 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 ACAA2P42765 397 aaKnown RBP16.79■□□□□ 0.28
SCARF1-202ENST00000348987 NAAAQ02083 359 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 EXOSC6Q5RKV6 272 aaKnown RBP16.79■□□□□ 0.28
SCARF1-202ENST00000348987 SLC16A9Q7RTY1 509 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 SAMD14Q8IZD0 417 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-202ENST00000348987 PRSS35Q8N3Z0 413 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 ZSCAN4Q8NAM6 433 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-202ENST00000348987 MCHR2Q969V1 340 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 SRA1Q9HD15 236 aaKnown RBP16.79■□□□□ 0.28
SCARF1-202ENST00000348987 DUSP22Q9NRW4 184 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 CACNA1IQ9P0X4 2223 aa16.79■□□□□ 0.28
SCARF1-202ENST00000348987 A0A1W2PPC1 479 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 A6NLC8 198 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 IGHV2-5P01817 119 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 PPICP45877 212 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 FAM76BQ5HYJ3 339 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 KRBOX4Q5JUW0 171 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 DHRS11Q6UWP2 260 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 SLC43A2Q8N370 569 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 CDRT4Q8N9R6 151 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 SLC22A18Q96BI1 424 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 AKR1E2Q96JD6 320 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 PFDN5Q99471 154 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 RNF126Q9BV68 326 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 KLK13Q9UKR3 277 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 FITM1A5D6W6 292 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 BRINP1O60477 761 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 KLK3P07288 261 aaPredicted RBP16.78■□□□□ 0.28
SCARF1-202ENST00000348987 AKR1C4P17516 323 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 PAX6P26367 422 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 ADH6P28332 368 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 NTSR1P30989 418 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 EIF2S3P41091 472 aaKnown RBP16.78■□□□□ 0.28
SCARF1-202ENST00000348987 ADAM8P78325 824 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 KIR2DS3Q14952 304 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 DRAM2Q6UX65 266 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 MRGPRFQ96AM1 343 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 TMEM41AQ96HV5 264 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 ZFYVE21Q9BQ24 234 aa16.78■□□□□ 0.28
SCARF1-202ENST00000348987 MSGN1A6NI15 193 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 ZNF729A6NN14 1252 aaPredicted RBP16.77■□□□□ 0.28
SCARF1-202ENST00000348987 HRKO00198 91 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 DCTN6O00399 190 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 SLC17A2O00624 439 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 TNFSF14O43557 240 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 GPR75O95800 540 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 HYAL1Q12794 435 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 FAM53BQ14153 422 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 ZNF585AQ6P3V2 769 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 ADAD2Q8NCV1 583 aaKnown RBP16.77■□□□□ 0.28
SCARF1-202ENST00000348987 TCTEX1D2Q8WW35 142 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 FAM131CQ96AQ9 280 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 SULT4A1Q9BR01 284 aa16.77■□□□□ 0.28
SCARF1-202ENST00000348987 A0A0A6YYC8 382 aaPredicted RBP16.77■□□□□ 0.27
SCARF1-202ENST00000348987 H0YIZ8 118 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 I3L1I5 382 aaPredicted RBP16.77■□□□□ 0.27
SCARF1-202ENST00000348987 LY86O95711 162 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 AK1P00568 194 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 MT-ND4LP03901 98 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 ERCC1P07992 297 aaPredicted RBP16.77■□□□□ 0.27
SCARF1-202ENST00000348987 HOXB2P14652 356 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 CD1CP29017 333 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 SERPINF1P36955 418 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 GPX4P36969 197 aaPredicted RBP16.77■□□□□ 0.27
SCARF1-202ENST00000348987 MAP3K8P41279 467 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 EIF2B1Q14232 305 aaKnown RBP16.77■□□□□ 0.27
SCARF1-202ENST00000348987 NFATC4Q14934 902 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 MOGAT2Q3SYC2 334 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 CDNFQ49AH0 187 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 PAPD4Q6PIY7 484 aaKnown RBP16.77■□□□□ 0.27
SCARF1-202ENST00000348987 KIRREL2Q6UWL6 708 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 ROBO4Q8WZ75 1007 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 MKKSQ9NPJ1 570 aaPredicted RBP16.77■□□□□ 0.27
SCARF1-202ENST00000348987 LAMP5Q9UJQ1 280 aa16.77■□□□□ 0.27
SCARF1-202ENST00000348987 TMEM235A6NFC5 223 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 IGKV1D-16P01601 117 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 ATXN8OSP0DMR3 200 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 LPAR6P43657 344 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 DEFB110Q30KQ9 67 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 NCMAPQ5T1S8 102 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 OTPQ5XKR4 325 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 OR52R1Q8NGF1 315 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 RBM18Q96H35 190 aaKnown RBP16.76■□□□□ 0.27
SCARF1-202ENST00000348987 WDR92Q96MX6 357 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 CACFD1Q9UGQ2 172 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 MRPS33Q9Y291 106 aaKnown RBP16.76■□□□□ 0.27
SCARF1-202ENST00000348987 hCG_1809904A0A1W2PP81 198 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 A0A1W2PR64 198 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 A0A1W2PRV1 198 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 TMEM212A6NML5 194 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 BLOC1S5-TXNDC5H3BN57 136 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 ARPC3O15145 178 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 IL2RAP01589 272 aa16.76■□□□□ 0.27
SCARF1-202ENST00000348987 NME2P22392 152 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms