RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 NSDHLQ15738 373 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 ASPHD2Q6ICH7 369 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 FBXO46Q6PJ61 603 aaPredicted RBP13.11□□□□□ -0.31
SMTN-202ENST00000347557 Q6ZS52 159 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.11□□□□□ -0.31
SMTN-202ENST00000347557 BVESQ8NE79 360 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 ZNF587Q96SQ5 575 aaPredicted RBP13.11□□□□□ -0.31
SMTN-202ENST00000347557 NPAS1Q99742 590 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 MED12Q93074 2177 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 LOC101059948A0A1B0GTJ6 334 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 KRBOX1C9JBD0 128 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 D6RAR5 112 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 CLPSP04118 112 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 ZNF823P16415 610 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 AKR1C4P17516 323 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 PPICP45877 212 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 RPL27P61353 136 aaKnown RBP13.11□□□□□ -0.31
SMTN-202ENST00000347557 SHHQ15465 462 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 DEFB133Q30KQ1 61 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 KCTD18Q6PI47 426 aaPredicted RBP13.11□□□□□ -0.31
SMTN-202ENST00000347557 ZSCAN1Q8NBB4 408 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 ASB5Q8WWX0 329 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 TCTN2Q96GX1 697 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 SPACA5Q96QH8 159 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 SLC6A7Q99884 636 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 NUDT9Q9BW91 350 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 FBRSQ9HAH7 460 aa13.11□□□□□ -0.31
SMTN-202ENST00000347557 EXOSC3Q9NQT5 275 aaKnown RBP13.11□□□□□ -0.31
SMTN-202ENST00000347557 IGHV3-20A0A0C4DH32 117 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 KANTRA0A1W2PQU2 76 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 OR5H14A6NHG9 310 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 H0YIG0 161 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 DCNP07585 359 aaKnown RBP13.1□□□□□ -0.31
SMTN-202ENST00000347557 AVPR2P30518 371 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 UNQ6126/PRO20091Q6UXV3 157 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 COMMD2Q86X83 199 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 ZNF584Q8IVC4 421 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 NUDCD2Q8WVJ2 157 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 SLC41A2Q96JW4 573 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 ESRP2Q9H6T0 727 aaKnown RBP13.1□□□□□ -0.31
SMTN-202ENST00000347557 LDAHQ9H6V9 325 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 PDE7BQ9NP56 450 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 CABIN1Q9Y6J0 2220 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 TRAV36DV7A0A075B6V5 113 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 TMED7-TICAM2A0A0A6YYA0 188 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 GATCO43716 136 aaKnown RBP13.1□□□□□ -0.31
SMTN-202ENST00000347557 FABP1P07148 127 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 PMPCAQ10713 525 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 DHRS2Q13268 280 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 SERTAD2Q14140 314 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 FNDC7Q5VTL7 733 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 DCXRQ7Z4W1 244 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 FAM219AQ8IW50 185 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 ARHGEF39Q8N4T4 335 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 PXT1Q8NFP0 134 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 OR5M9Q8NGP3 310 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 GPX8Q8TED1 209 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 VRK1Q99986 396 aaPredicted RBP13.1□□□□□ -0.31
SMTN-202ENST00000347557 DPYSL5Q9BPU6 564 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 UTP23Q9BRU9 249 aaKnown RBP13.1□□□□□ -0.31
SMTN-202ENST00000347557 WDR13Q9H1Z4 485 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 PLCL2Q9UPR0 1127 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 TMED7Q9Y3B3 224 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 UNC13CQ8NB66 2214 aa13.1□□□□□ -0.31
SMTN-202ENST00000347557 TRAV14DV4A0A0A6YYC5 116 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 LOC107986453A0A1B0GWG9 222 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 CAPZA1P52907 286 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 EMC4Q5J8M3 183 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 ATPAF1Q5TC12 328 aaPredicted RBP13.09□□□□□ -0.31
SMTN-202ENST00000347557 SLC25A28Q96A46 364 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 ZBTB8AQ96BR9 441 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 NUDT22Q9BRQ3 303 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 HS3ST3A1Q9Y663 406 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 TMEM269A0A1B0GVZ9 245 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 TUBAL3A6NHL2 446 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 TXNDC12O95881 172 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 BGLAPP02818 100 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 TMEM185AQ8NFB2 350 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 RNF128Q8TEB7 428 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 FGGYQ96C11 551 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 EMC6Q9BV81 110 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 MED29Q9NX70 200 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 EPHA6Q9UF33 1036 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 VDAC3Q9Y277 283 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 PCNX3Q9H6A9 2034 aa13.09□□□□□ -0.31
SMTN-202ENST00000347557 C5orf51A6NDU8 294 aa13.08□□□□□ -0.31
SMTN-202ENST00000347557 RFPL4AA6NLU0 287 aa13.08□□□□□ -0.31
SMTN-202ENST00000347557 F5H0A9 414 aaPredicted RBP13.08□□□□□ -0.31
SMTN-202ENST00000347557 RFPL4AL1F8VTS6 287 aa13.08□□□□□ -0.31
SMTN-202ENST00000347557 PHYHO14832 338 aa13.08□□□□□ -0.31
SMTN-202ENST00000347557 PMS2P2O95744 297 aa13.08□□□□□ -0.31
SMTN-202ENST00000347557 CSRP1P21291 193 aaKnown RBP13.08□□□□□ -0.31
SMTN-202ENST00000347557 IGLV3-21P80748 117 aaPredicted RBP13.08□□□□□ -0.31
SMTN-202ENST00000347557 GFOD2Q3B7J2 385 aa13.08□□□□□ -0.31
SMTN-202ENST00000347557 RNASE10Q5GAN6 216 aaKnown RBP13.08□□□□□ -0.31
SMTN-202ENST00000347557 SLC46A1Q96NT5 459 aa13.08□□□□□ -0.31
SMTN-202ENST00000347557 MBD2Q9UBB5 411 aa13.08□□□□□ -0.31
SMTN-202ENST00000347557 SHISA8B8ZZ34 492 aa13.08□□□□□ -0.32
SMTN-202ENST00000347557 AHSA1O95433 338 aa13.08□□□□□ -0.32
SMTN-202ENST00000347557 MYF5P13349 255 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms