RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 TIMM8AO60220 97 aaPredicted RBP13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 ICMTO60725 284 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 FKBP6O75344 327 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 DEAF1O75398 565 aaPredicted RBP13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 MPZL1O95297 269 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 SOX14O95416 240 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 CLPTM1O96005 669 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 SCG5P05408 212 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 NAT2P11245 290 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 ANXA8P13928 327 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 ZNF3P17036 446 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 PAICSP22234 425 aaKnown RBP13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 WNT5AP41221 380 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 ZNF81P51508 661 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 BLVRAP53004 296 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 MRPS11P82912 194 aaKnown RBP13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 ECH1Q13011 328 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 MSMPQ1L6U9 139 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 TMEM249Q2WGJ8 235 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 ELFN2Q5R3F8 820 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 SPATA46Q5T0L3 261 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 MBNL2Q5VZF2 373 aaKnown RBP13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 CYB5R2Q6BCY4 276 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 CD300LDQ6UXZ3 194 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 ZBTB46Q86UZ6 589 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 ZNF101Q8IZC7 436 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 KLF14Q8TD94 323 aaPredicted RBP13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 DIRC2Q96SL1 478 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 FEVQ99581 238 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 PITX2Q99697 317 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 OR2J1Q9GZK6 312 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 EGLN1Q9GZT9 426 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 CHODLQ9H9P2 273 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 NKIRAS2Q9NYR9 191 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 MYEF2Q9P2K5 600 aaKnown RBP13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 DNAJB9Q9UBS3 223 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 CSPG4Q6UVK1 2322 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 OR6C68A6NDL8 312 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 DCTN6O00399 190 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 RER1O15258 196 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 CIB2O75838 187 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 ACHEP22303 614 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 TNFSF4P23510 183 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 GIFP27352 417 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 FMO3P31513 532 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 CHN2P52757 468 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 RFPL4BQ6ZWI9 263 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 CYB561A3Q8NBI2 242 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 SLC26A10Q8NG04 563 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 MARS2Q96GW9 593 aaKnown RBP13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 COQ7Q99807 217 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 CADM1Q9BY67 442 aaKnown RBP13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 BPESC1Q9GZL8 116 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 FN3KQ9H479 309 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 VNN3Q9NY84 501 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 KIF17Q9P2E2 1029 aa13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 SETD2Q9BYW2 2564 aaPredicted RBP13.5□□□□□ -0.25
TSPAN4-201ENST00000346501 TCRBV3S1A0A5B6 114 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 A8MV72 311 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 VWC2LB2RUY7 222 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 GAAP10253 952 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 ZNF23P17027 643 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 POU1F1P28069 291 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 GPR6P46095 362 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 TMEM33P57088 247 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 CCL8P80075 99 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 MEP1BQ16820 701 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 C1orf146Q5VVC0 180 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 SLC27A4Q6P1M0 643 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 ATG16L2Q8NAA4 619 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 DNAJC9Q8WXX5 260 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 APOBEC3DQ96AK3 386 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 OTULINQ96BN8 352 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 PLEKHA8Q96JA3 519 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 PLA2G12AQ9BZM1 189 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 SAP30LQ9HAJ7 183 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 ARMC1Q9NVT9 282 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 ZDHHC8Q9ULC8 765 aa13.49□□□□□ -0.25
TSPAN4-201ENST00000346501 RTTNQ86VV8 2226 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 INAFM1C9JVW0 142 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 NGFP01138 241 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 HPXP02790 462 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 HMGN1P05114 100 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 PYCR1P32322 319 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 GRK5P34947 590 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 CCDC92Q53HC0 331 aaPredicted RBP13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 OTPQ5XKR4 325 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 CORO6Q6QEF8 472 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 SLC37A3Q8NCC5 494 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 PAPD5Q8NDF8 572 aaKnown RBP13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 OR8D4Q8NGM9 314 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 OR6K6Q8NGW6 343 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 PTP4A1Q93096 173 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 SPTSSAQ969W0 71 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 ELMOD3Q96FG2 381 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 TIMD4Q96H15 378 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 ATF6BQ99941 703 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 NIPSNAP1Q9BPW8 284 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 LHFPL6Q9Y693 200 aa13.48□□□□□ -0.25
TSPAN4-201ENST00000346501 SURF4O15260 269 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms