RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 NAAAQ02083 359 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 KRTAP1-1Q07627 177 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 DBPQ10586 325 aaPredicted RBP13.93□□□□□ -0.18
RAB5C-201ENST00000346213 AQP6Q13520 282 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 ARMCX4Q5H9R4 360 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 SHEQ5VZ18 495 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 DNM1P46Q6ZS02 220 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 ZNF627Q7L945 461 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 NANOGNBQ7Z5D8 188 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 NANOGP1Q8N7R0 232 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 MAPK1IP1LQ8NDC0 245 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 PROKR2Q8NFJ6 384 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 OR6X1Q8NH79 312 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 ASB10Q8WXI3 467 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 RNFT2Q96EX2 444 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 DCUN1D5Q9BTE7 237 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 IFT27Q9BW83 186 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 MRPL13Q9BYD1 178 aaKnown RBP13.93□□□□□ -0.18
RAB5C-201ENST00000346213 HINT3Q9NQE9 182 aaKnown RBP13.93□□□□□ -0.18
RAB5C-201ENST00000346213 OR6C65A6NJZ3 312 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 NDUFB2O95178 105 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 HTR1FP30939 366 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 IDH3GP51553 393 aaPredicted RBP13.92□□□□□ -0.18
RAB5C-201ENST00000346213 FMODQ06828 376 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 HIST3H3Q16695 136 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 ARMC4Q5T2S8 1044 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 CXXC5Q7LFL8 322 aaKnown RBP13.92□□□□□ -0.18
RAB5C-201ENST00000346213 ABHD12BQ7Z5M8 362 aaPredicted RBP13.92□□□□□ -0.18
RAB5C-201ENST00000346213 ZNF584Q8IVC4 421 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 CPOQ8IVL8 374 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 GID4Q8IVV7 300 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 OR5M11Q96RB7 305 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 MGLLQ99685 303 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 DHRS9Q9BPW9 319 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 MND1Q9BWT6 205 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 ULBP2Q9BZM5 246 aa13.92□□□□□ -0.18
RAB5C-201ENST00000346213 H2AFY2Q9P0M6 372 aaPredicted RBP13.92□□□□□ -0.18
RAB5C-201ENST00000346213 NSD1Q96L73 2696 aaPredicted RBP13.92□□□□□ -0.18
RAB5C-201ENST00000346213 SMAD7O15105 426 aaKnown RBP13.91□□□□□ -0.18
RAB5C-201ENST00000346213 BCL10O95999 233 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 NR4A1P22736 598 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 CSNK1A1P48729 337 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 TNK1Q13470 666 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 MED22Q15528 200 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 PPP1R14BQ96C90 147 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 RADILQ96JH8 1075 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 C18orf12Q96KH6 178 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 FOXB1Q99853 325 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 CACNG6Q9BXT2 260 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 GLTPQ9NZD2 209 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 CLEC2DQ9UHP7 191 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 EXOGQ9Y2C4 368 aaKnown RBP13.91□□□□□ -0.18
RAB5C-201ENST00000346213 EXOSC1Q9Y3B2 195 aaKnown RBP13.91□□□□□ -0.18
RAB5C-201ENST00000346213 ATP23Q9Y6H3 246 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 IGHV2OR16-5A0A0B4J2B6 119 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 IMPA2O14732 288 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 ZNF14P17017 642 aaPredicted RBP13.91□□□□□ -0.18
RAB5C-201ENST00000346213 ZNF182P17025 639 aaPredicted RBP13.91□□□□□ -0.18
RAB5C-201ENST00000346213 RGS6P49758 472 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 SPCS2Q15005 226 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 SPHARQ15513 63 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 ZNF362Q5T0B9 420 aaPredicted RBP13.91□□□□□ -0.18
RAB5C-201ENST00000346213 SLC35F1Q5T1Q4 408 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 PRSS57Q6UWY2 283 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 ZNF813Q6ZN06 617 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 SKA3Q8IX90 412 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 MUC15Q8N387 334 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 SYT14Q8NB59 555 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 OR6N1Q8NGY5 312 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 OBP2BQ9NPH6 170 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 POU2F3Q9UKI9 436 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 HIF3AQ9Y2N7 669 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 UGT2A1Q9Y4X1 527 aa13.91□□□□□ -0.18
RAB5C-201ENST00000346213 A0A096LNT2 108 aa13.9□□□□□ -0.18
RAB5C-201ENST00000346213 PPP1R3DO95685 299 aa13.9□□□□□ -0.18
RAB5C-201ENST00000346213 WNT11O96014 354 aa13.9□□□□□ -0.18
RAB5C-201ENST00000346213 CBR1P16152 277 aa13.9□□□□□ -0.18
RAB5C-201ENST00000346213 UBE2NP61088 152 aaKnown RBP13.9□□□□□ -0.18
RAB5C-201ENST00000346213 TMED1Q13445 227 aa13.9□□□□□ -0.18
RAB5C-201ENST00000346213 SWI5Q1ZZU3 235 aa13.9□□□□□ -0.18
RAB5C-201ENST00000346213 DPY19L2P2Q6ZN68 376 aa13.9□□□□□ -0.18
RAB5C-201ENST00000346213 MEPCEQ7L2J0 689 aaKnown RBP13.9□□□□□ -0.18
RAB5C-201ENST00000346213 NOXO1Q8NFA2 376 aa13.9□□□□□ -0.18
RAB5C-201ENST00000346213 BBS1Q8NFJ9 593 aa13.9□□□□□ -0.18
RAB5C-201ENST00000346213 SLC25A44Q96H78 314 aaPredicted RBP13.9□□□□□ -0.18
RAB5C-201ENST00000346213 TSPAN32Q96QS1 320 aa13.9□□□□□ -0.18
RAB5C-201ENST00000346213 FN1P02751 2386 aaKnown RBP13.9□□□□□ -0.18
RAB5C-201ENST00000346213 TMEM129A0AVI4 362 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 FAM183AA6NL82 134 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 ZNF726A6NNF4 738 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 RIIAD1A6NNX1 92 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 PRR23D1E9PI22 279 aaPredicted RBP13.89□□□□□ -0.19
RAB5C-201ENST00000346213 MYL12BO14950 172 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 AKAP8O43823 692 aaKnown RBP13.89□□□□□ -0.19
RAB5C-201ENST00000346213 LY6G6DO95868 133 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 SCG5P05408 212 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 QDPRP09417 244 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 INHBBP09529 407 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 HSMCR30P0CW71 290 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 PRR23D2P0DMB1 279 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms