RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TMED1Q13445 227 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 APOFQ13790 326 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 KEAP1Q14145 624 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 RAB35Q15286 201 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 TAF13Q15543 124 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 MEP1BQ16820 701 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 ELFN2Q5R3F8 820 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 OGFRL1Q5TC84 451 aaPredicted RBP10.26□□□□□ -0.77
SNCA-202ENST00000345009 MEDAGQ5VYS4 303 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 ZNF774Q6NX45 483 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 ZNF544Q6NX49 715 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 MEPCEQ7L2J0 689 aaKnown RBP10.26□□□□□ -0.77
SNCA-202ENST00000345009 ERI1Q8IV48 349 aaKnown RBP10.26□□□□□ -0.77
SNCA-202ENST00000345009 FBXL14Q8N1E6 418 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 DHRSXQ8N5I4 330 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 ZNF611Q8N823 705 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 CPEB3Q8NE35 698 aaKnown RBP10.26□□□□□ -0.77
SNCA-202ENST00000345009 NUP37Q8NFH4 326 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 KBTBD8Q8NFY9 601 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 OR1F12Q8NHA8 337 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 AKR7LQ8NHP1 331 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 Q96MT0 163 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 COG8Q96MW5 612 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 ZNF75AQ96N20 296 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 DCLRE1CQ96SD1 692 aaKnown RBP10.26□□□□□ -0.77
SNCA-202ENST00000345009 TEAD3Q99594 435 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 DHRS9Q9BPW9 319 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 BCL2L14Q9BZR8 327 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 PLEKHF2Q9H8W4 249 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 ELOVL3Q9HB03 270 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 NOX3Q9HBY0 568 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 FAM118AQ9NWS6 357 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 MRPL22Q9NWU5 206 aaKnown RBP10.26□□□□□ -0.77
SNCA-202ENST00000345009 FBXO9Q9UK97 447 aaPredicted RBP10.26□□□□□ -0.77
SNCA-202ENST00000345009 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.26□□□□□ -0.77
SNCA-202ENST00000345009 LHFPL6Q9Y693 200 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 TMEM14AQ9Y6G1 99 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 COMMD3-BMI1R4GMX3 469 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 ANKRD17O75179 2603 aaKnown RBP10.26□□□□□ -0.77
SNCA-202ENST00000345009 RER1O15258 196 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 GPANK1O95872 356 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 PLAUP00749 431 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 ZNF35P13682 527 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 NR4A1P22736 598 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 TUBG1P23258 451 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 DNASE1P24855 282 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 APOBEC3AP31941 199 aaPredicted RBP10.25□□□□□ -0.77
SNCA-202ENST00000345009 FABP6P51161 128 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 NUDT6P53370 316 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 SNRPGP62308 76 aaKnown RBP10.25□□□□□ -0.77
SNCA-202ENST00000345009 EFNB1P98172 346 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 LINC01590Q5TEZ4 76 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 AGAP6Q5VW22 663 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 SLC18B1Q6NT16 456 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 ZNF584Q8IVC4 421 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 LINC00346Q8IVM7 164 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 SETD9Q8NE22 299 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 SMAP2Q8WU79 429 aaPredicted RBP10.25□□□□□ -0.77
SNCA-202ENST00000345009 CYGBQ8WWM9 190 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 PIGTQ969N2 578 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 SPTSSAQ969W0 71 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 ZMYND19Q96E35 227 aaPredicted RBP10.25□□□□□ -0.77
SNCA-202ENST00000345009 LURAP1Q96LR2 239 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 COQ7Q99807 217 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 HCAR1Q9BXC0 346 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 YIPF3Q9GZM5 350 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 WNT5BQ9H1J7 359 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 WDR76Q9H967 626 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 MARCH7Q9H992 704 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 TUBG2Q9NRH3 451 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 CLN6Q9NWW5 311 aa10.25□□□□□ -0.77
SNCA-202ENST00000345009 WARS2Q9UGM6 360 aaKnown RBP10.25□□□□□ -0.77
SNCA-202ENST00000345009 GDF2Q9UK05 429 aaPredicted RBP10.25□□□□□ -0.77
SNCA-202ENST00000345009 HRNRQ86YZ3 2850 aaPredicted RBP10.24□□□□□ -0.77
SNCA-202ENST00000345009 CREBBPQ92793 2442 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 CCDC168Q8NDH2 2452 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 H0YAE9 185 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 H0YJX3 145 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 SYNGR3O43761 229 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 ABHD16AO95870 558 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 APOC1P02654 83 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 RAF1P04049 648 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 SLC2A5P22732 501 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 GLRXP35754 106 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 SERPINF1P36955 418 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 RGS6P49758 472 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 UCP2P55851 309 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 HIST1H3AP68431 136 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 SNTB2Q13425 540 aaKnown RBP10.24□□□□□ -0.77
SNCA-202ENST00000345009 IL18R1Q13478 541 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 MOGQ16653 247 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 PCK2Q16822 640 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 SLC25A30Q5SVS4 291 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 HIST2H3PS2Q5TEC6 136 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 AADACL4Q5VUY2 407 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 TMEM154Q6P9G4 183 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 CORO6Q6QEF8 472 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 HIST2H3AQ71DI3 136 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 RHOUQ7L0Q8 258 aa10.24□□□□□ -0.77
SNCA-202ENST00000345009 SLC16A9Q7RTY1 509 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms