RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PTPRQQ9UMZ3 2332 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 A0A1W2PQD3 144 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 TMEM129A0AVI4 362 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 ZAR1LA6NP61 321 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 LILRB5O75023 590 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 ADH6P28332 368 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 PAQR6Q6TCH4 344 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 BCDIN3DQ7Z5W3 292 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 ZNF573Q86YE8 665 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 ZNF679Q8IYX0 411 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 MSMO1Q15800 293 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 LPCAT3Q6P1A2 487 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 OR14A2Q96R54 314 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 RANBP3Q9H6Z4 567 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 LIN7BQ9HAP6 207 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 DNAJB12Q9NXW2 375 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 TP53TG5Q9Y2B4 290 aa14.79□□□□□ -0.04
SMARCA4-201ENST00000344626 SULT1C4O75897 302 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 GUSBP08236 651 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 SRP9P49458 86 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 USP51Q70EK9 711 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 TCRBV5S2A0A599 114 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 HPGDSO60760 199 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 NDUFB7P17568 137 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 INSM1Q01101 510 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 GAB4Q2WGN9 574 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 ACSM5Q6NUN0 579 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 OR8H3Q8N146 312 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 CPNE5Q9HCH3 593 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 ALPK2Q86TB3 2170 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 DOPEY2Q9Y3R5 2298 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 DOCK6Q96HP0 2047 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 TCRBV16S1A1N1A0A5B0 115 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 FXYD1O00168 92 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 PRAF2O60831 178 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 RAF1P04049 648 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 CENPSQ8N2Z9 138 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 CLDN22Q8N7P3 220 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 TMIGD2Q96BF3 282 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 ZC3H10Q96K80 434 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 NUBP2Q9Y5Y2 271 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 BTBD17A6NE02 478 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 EPHA1P21709 976 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 HOXA6P31267 233 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 AQP6Q13520 282 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 LHFPL2Q6ZUX7 228 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 OR10D3Q8NH80 312 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 KTI12Q96EK9 354 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 BCO1Q9HAY6 547 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 SDHAF2Q9NX18 166 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 ETAA1Q9NY74 926 aa14.78□□□□□ -0.04
SMARCA4-201ENST00000344626 FGF5P12034 268 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 ETV5P41161 510 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 GSG1Q2KHT4 349 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 PAN3Q58A45 887 aaKnown RBP14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 SYS1Q8N2H4 156 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 FOXJ2Q9P0K8 574 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 LOC107986453A0A1B0GWG9 222 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 TRDV1A0A1B0GX56 115 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 CT62P0C5K7 136 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 ACP1P24666 158 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 METTL11BQ5VVY1 283 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 STOML3Q8TAV4 291 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 OR51E1Q8TCB6 317 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 JAM3Q9BX67 310 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 ZNF224Q9NZL3 707 aa14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 EXO1Q9UQ84 846 aaKnown RBP14.77□□□□□ -0.04
SMARCA4-201ENST00000344626 NINQ8N4C6 2090 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 PMP22Q01453 160 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 METAP1DQ6UB28 335 aaPredicted RBP14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 CFAP77Q6ZQR2 320 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 ADGRE4PQ86SQ3 457 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 ZNF808Q8N4W9 903 aaPredicted RBP14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 GATA6Q92908 595 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 SLCO4A1Q96BD0 722 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 NARFLQ9H6Q4 476 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 B9D1Q9UPM9 204 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 SLCO1B1Q9Y6L6 691 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 CREBBPQ92793 2442 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 CYR61O00622 381 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 UBE2UQ5VVX9 321 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 CORO6Q6QEF8 472 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 GLIPR1L1Q6UWM5 242 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 LSRQ86X29 649 aaPredicted RBP14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 LILRB2Q8N423 598 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 NLKQ9UBE8 527 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 PCDHGA3Q9Y5H0 932 aa14.77□□□□□ -0.05
SMARCA4-201ENST00000344626 LYZL6O75951 148 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 C1QAP02745 245 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 PEBP1P30086 187 aaKnown RBP14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 TIAL1Q01085 375 aaKnown RBP eCLIP14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 EGFL6Q8IUX8 553 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 FNDC9Q8TBE3 224 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 APOBEC3DQ96AK3 386 aaPredicted RBP14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 GPR173Q9NS66 373 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 OTOFQ9HC10 1997 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 ACACBO00763 2458 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 LOC100289279A0A1B0GTE1 492 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 BET1O15155 118 aa14.76□□□□□ -0.05
SMARCA4-201ENST00000344626 RP2O75695 350 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms