RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 BRS3P32247 399 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PIGAP37287 484 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 FBXO16Q8IX29 292 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 FRS3O43559 492 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 GALR3O60755 368 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 XYLBO75191 536 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PIAS2O75928 621 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ATP1B1P05026 303 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TBC1D3HP0C7X1 549 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ATP1B2P14415 290 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 HMGA2P52926 109 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 UBE2V1Q13404 147 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MESTQ5EB52 335 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 CPZQ66K79 652 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 GPBAR1Q8TDU6 330 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 UQCC1Q9NVA1 299 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 RAPGEF6Q8TEU7 1601 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ECI2O75521 394 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 RHOQP17081 205 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TACR1P25103 407 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 OR1E1P30953 314 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ARRB2P32121 409 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 IFITM3Q01628 133 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 CXCL9Q07325 125 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PRICKLE4Q2TBC4 344 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 CST9LP1Q5W188 147 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 C16orf54Q6UWD8 224 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 DLEU7Q6UYE1 221 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM64Q6YI46 380 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 RNF111Q6ZNA4 994 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF382Q96SR6 550 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 EBPLQ9BY08 206 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 CPEB1Q9BZB8 566 aaKnown RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 RAMP2O60895 175 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TXNDC12O95881 172 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 DCTP40126 519 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 KHDC3LQ587J8 217 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF534Q76KX8 674 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF429Q86V71 674 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MOB3AQ96BX8 217 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ZFP64Q9NPA5 681 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 GPRC5CQ9NQ84 441 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 V9GY05 133 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PHF1O43189 567 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 GPR39O43194 453 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 DPY19L2P2Q6ZN68 376 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 TTC9BQ8N6N2 239 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MECRQ9BV79 373 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 RIOX1Q9H6W3 641 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MANBALQ9NQG1 85 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MYO7BQ6PIF6 2116 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 EDDM13A0A1B0GTR0 161 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SLC35B1P78383 322 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SLC14A1Q13336 389 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 SSX1Q16384 188 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 AADACL3Q5VUY0 350 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 LSRQ86X29 649 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 RBMXL3Q8N7X1 1067 aaKnown RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ZDHHC22Q8N966 263 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 PDLIM5Q96HC4 596 aaKnown RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 MIEN1Q9BRT3 115 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 COMMD5Q9GZQ3 224 aa3.46□□□□□ -1.86
SYNE2-202ENST00000344113 WDR55Q9H6Y2 383 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 ZMAT3Q9HA38 289 aaKnown RBP3.46□□□□□ -1.86
SYNE2-202ENST00000344113 FAM3AP98173 230 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PAX5Q02548 391 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 TCP10Q12799 353 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 KIAA0895LQ68EN5 471 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 HMGN2P46Q86SG4 172 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 GLIS1Q8NBF1 620 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 DDIT4LQ96D03 193 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ALKBH7Q9BT30 221 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 DUSP23Q9BVJ7 150 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 HEXA-AS1Q9H8Q6 139 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 BPIFA1Q9NP55 256 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MS4A2Q01362 244 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 NHLH1Q02575 133 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CT83Q5H943 113 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 SMIM3Q9BZL3 60 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 GPX5O75715 221 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ACVR1BP36896 505 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 AMTP48728 403 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 RAB6CQ53S08 254 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PRODH2Q9UF12 536 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 A0A1W2PR80 420 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CD8AP01732 235 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MIPP30301 263 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PLPP4Q5VZY2 271 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 OGFOD3Q6PK18 319 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 LHFPL2Q6ZUX7 228 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 RIMKLAQ8IXN7 391 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CSNK1A1LQ8N752 337 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 SNRNP25Q9BV90 132 aaKnown RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 RAB33BQ9H082 229 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PSAT1Q9Y617 370 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 IFITM5A6NNB3 132 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 SLC37A4O43826 429 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CR2P20023 1033 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 FAHD1Q6P587 224 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms