RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 M0QYG6 137 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 SLC22A5O76082 557 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 CELA2AP08217 269 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 AKAIN1P0CW23 69 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 PTGDSP41222 190 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 OR3A3P47888 321 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 MOGAT2Q3SYC2 334 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 ACBD4Q8NC06 268 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 SLAMF6Q96DU3 332 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 PIPOXQ9P0Z9 390 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 B3GAT1Q9P2W7 334 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 NCOR1O75376 2440 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 ZNF208O43345 1280 aa13.27□□□□□ -0.28
VIPAS39-202ENST00000343765 HRGP04196 525 aa13.27□□□□□ -0.28
VIPAS39-202ENST00000343765 KLK2P20151 261 aa13.27□□□□□ -0.28
VIPAS39-202ENST00000343765 C2orf68Q2NKX9 166 aa13.27□□□□□ -0.28
VIPAS39-202ENST00000343765 HLA-BQ31612 363 aa13.27□□□□□ -0.28
VIPAS39-202ENST00000343765 OR4D6Q8NGJ1 314 aa13.27□□□□□ -0.28
VIPAS39-202ENST00000343765 SAP25Q8TEE9 199 aa13.27□□□□□ -0.28
VIPAS39-202ENST00000343765 TAS2R8Q9NYW2 309 aa13.27□□□□□ -0.28
VIPAS39-202ENST00000343765 EXPH5Q8NEV8 1989 aa13.27□□□□□ -0.28
VIPAS39-202ENST00000343765 ZNF814B7Z6K7 855 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 MEN1O00255 615 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 CFDP00746 253 aaPredicted RBP13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 CFIP05156 583 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 CSN2P05814 226 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 FSTP19883 344 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 ACHEP22303 614 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 CLRN1P58418 232 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 GRK1Q15835 563 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 ZNF385CQ66K41 422 aaPredicted RBP13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 STEAP1BQ6NZ63 245 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 ZNF704Q6ZNC4 412 aaPredicted RBP13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 ADGRE4PQ86SQ3 457 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 CDH24Q86UP0 819 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 UEVLDQ8IX04 471 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 OR6M1Q8NGM8 313 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 TTC9Q92623 222 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 FAM46BQ96A09 425 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 SORCS2Q96PQ0 1159 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 RBP7Q96R05 134 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 DEFB126Q9BYW3 111 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 CHST6Q9GZX3 395 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 EXO5Q9H790 373 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 TMEM138Q9NPI0 162 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 SDHAF3Q9NRP4 125 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 B3GALT5Q9Y2C3 310 aa13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 RPH3AQ9Y2J0 694 aaPredicted RBP13.27□□□□□ -0.29
VIPAS39-202ENST00000343765 SMAD9O15198 467 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 RAMP1O60894 148 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 AQP8O94778 261 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 ACSM4P0C7M7 580 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 SLC2A1P11166 492 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 CFPP27918 469 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 MFAP5Q13361 173 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 EXOSC2Q13868 293 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 CFAP77Q6ZQR2 320 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 OR6S1Q8NH40 331 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 RNF133Q8WVZ7 376 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 ELMOD3Q96FG2 381 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 MRGPRX4Q96LA9 322 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 RASL10BQ96S79 203 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 GPR179Q6PRD1 2367 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 UBE2QL1A1L167 161 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 TMEM235A6NFC5 223 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 TNFRSF10AO00220 468 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 C4orf46Q504U0 113 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 B3GNTL1Q67FW5 361 aaPredicted RBP13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 KLHL24Q6TFL4 600 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 CHMP1BQ7LBR1 199 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 COMMD2Q86X83 199 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 GABRG1Q8N1C3 465 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 CLEC1AQ8NC01 280 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 SEH1LQ96EE3 360 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 TMA7Q9Y2S6 64 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 IL5P05113 134 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 CPN1P15169 458 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 ZNF28P17035 718 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 ENPP1P22413 925 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 PRKXP51817 358 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 PMPCAQ10713 525 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 PCK2Q16822 640 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 TMEM244Q5VVB8 128 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 C3orf33Q6P1S2 294 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 SLC36A1Q7Z2H8 476 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 TMED4Q7Z7H5 227 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 GALNT16Q8N428 558 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 FAM109AQ8N4B1 249 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 OR4K17Q8NGC6 315 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 OR10S1Q8NGN2 331 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 GPX8Q8TED1 209 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 CMBLQ96DG6 245 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 UTP23Q9BRU9 249 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 TINAGL1Q9GZM7 467 aaPredicted RBP13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 FAM206AQ9NX38 181 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 B3GNT2Q9NY97 397 aa13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 FARSAQ9Y285 508 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-202ENST00000343765 LEUTXA8MZ59 168 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 M0R233 179 aa13.25□□□□□ -0.29
VIPAS39-202ENST00000343765 GOSR2O14653 212 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms