RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 DMXL2Q8TDJ6 3036 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 RAD1O60671 282 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 DBIP07108 87 aaKnown RBP13.57□□□□□ -0.24
BRAT1-201ENST00000340611 ANXA2P07355 339 aaKnown RBP13.57□□□□□ -0.24
BRAT1-201ENST00000340611 GIPP09681 153 aaPredicted RBP13.57□□□□□ -0.24
BRAT1-201ENST00000340611 RPS4Y1P22090 263 aaKnown RBP13.57□□□□□ -0.24
BRAT1-201ENST00000340611 BDKRB2P30411 391 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 PPICP45877 212 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 LUMP51884 338 aaPredicted RBP13.57□□□□□ -0.24
BRAT1-201ENST00000340611 PRAMEF8Q5VWM4 474 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 PRAMEF7Q5VXH5 474 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 OR7E24Q6IFN5 339 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 C3orf33Q6P1S2 294 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 WDR88Q6ZMY6 472 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 NFAM1Q8NET5 270 aaPredicted RBP13.57□□□□□ -0.24
BRAT1-201ENST00000340611 C3orf49Q96BT1 292 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 POM121Q96HA1 1249 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 SLC25A32Q9H2D1 315 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 NPDC1Q9NQX5 325 aaPredicted RBP13.57□□□□□ -0.24
BRAT1-201ENST00000340611 KLHL28Q9NXS3 571 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 SLC7A7Q9UM01 511 aa13.57□□□□□ -0.24
BRAT1-201ENST00000340611 CCR4P51679 360 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 OR12D2P58182 307 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 ACSM3Q53FZ2 586 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 CDCP2Q5VXM1 449 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 C11orf88Q6PI97 169 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 ASCL5Q7RTU5 278 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 PIP4P1Q86T03 277 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 ALPK2Q86TB3 2170 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 MGAQ8IWI9 3026 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 MARS2Q96GW9 593 aaKnown RBP13.56□□□□□ -0.24
BRAT1-201ENST00000340611 C4orf36Q96KX1 117 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 CACYBPQ9HB71 228 aaKnown RBP13.56□□□□□ -0.24
BRAT1-201ENST00000340611 BARX1Q9HBU1 254 aaPredicted RBP13.56□□□□□ -0.24
BRAT1-201ENST00000340611 ZNF629Q9UEG4 869 aaPredicted RBP13.56□□□□□ -0.24
BRAT1-201ENST00000340611 MED13Q9UHV7 2174 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 PLEKHA6Q9Y2H5 1048 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 LRRN3E7EW58 273 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 J3QRE1 110 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 FMO6PO60774 539 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 SLC25A12O75746 678 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 UBL3O95164 117 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 WISP1O95388 367 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 FTH1P19P0C7X4 201 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 CLUP10909 449 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 ABCD3P28288 659 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 STAT5AP42229 794 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 DHODHQ02127 395 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 DECR1Q16698 335 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 OR52W1Q6IF63 320 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 NIPAL3Q6P499 406 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 TCTEX1D2Q8WW35 142 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 CMTM3Q96MX0 182 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 LPAR4Q99677 370 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 TCEAL7Q9BRU2 100 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 DPH1Q9BZG8 443 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 WASF3Q9UPY6 502 aa13.56□□□□□ -0.24
BRAT1-201ENST00000340611 SPTBN4Q9H254 2564 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 OTX2P32243 289 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 GDNFP39905 211 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 H2BFSP57053 126 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 ANKRD39Q53RE8 183 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 GDF7Q7Z4P5 450 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 ORAI1Q96D31 301 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 MISP3Q96FF7 219 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 IFT27Q9BW83 186 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 ALX4Q9H161 411 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-201ENST00000340611 NOX3Q9HBY0 568 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 ZMIZ1Q9ULJ6 1067 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 B4E171 279 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 C9J4A7 227 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 GOSR2O14653 212 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 TNFSF15O95150 251 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 UTS2O95399 124 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 PSMB1P20618 241 aaKnown RBP13.55□□□□□ -0.24
BRAT1-201ENST00000340611 PYCR1P32322 319 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 GALNSP34059 522 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 TSPAN7P41732 249 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 MMP15P51511 669 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 OR2B8PP59922 312 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 RPP30P78346 268 aaKnown RBP13.55□□□□□ -0.24
BRAT1-201ENST00000340611 PLCXD2Q0VAA5 305 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 ATXN7L3Q14CW9 347 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-201ENST00000340611 DCAF12L2Q5VW00 463 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 MARCH3Q86UD3 253 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 LRRTM1Q86UE6 522 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 MISPQ8IVT2 679 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 OR5J2Q8NH18 312 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 CT55Q8WUE5 264 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 SOX7Q9BT81 388 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 FN3KQ9H479 309 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 FBXL4Q9UKA2 621 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 PADI1Q9ULC6 663 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 AK6Q9Y3D8 172 aaKnown RBP13.55□□□□□ -0.24
BRAT1-201ENST00000340611 HS3ST3B1Q9Y662 390 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 DOCK10Q96BY6 2186 aa13.55□□□□□ -0.24
BRAT1-201ENST00000340611 CEP295Q9C0D2 2601 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 OR2M5A3KFT3 312 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 COLCA2A8K830 154 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 CREBL2O60519 120 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms