RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ZNF441Q8N8Z8 693 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 AQP11Q8NBQ7 271 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ACVR1CQ8NER5 493 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OR4K2Q8NGD2 314 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 SHISA4Q96DD7 197 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF778Q96MU6 729 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM82A0PJX8 343 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 LNP1A1A4G5 178 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TLCD2A6NGC4 264 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PRR19A6NJB7 356 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ERVH48-1M5A8F1 160 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 CORTO00230 105 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 EPHB6O15197 1021 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 COCHO43405 550 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 GSTZ1O43708 216 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TPMTP51580 245 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 GBE1Q04446 702 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 AANATQ16613 207 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 PLK5Q496M5 336 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 KHDC3LQ587J8 217 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 RIPPLY2Q5TAB7 128 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 C18orf63Q68DL7 685 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 C6orf89Q6UWU4 347 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF705AQ6ZN79 300 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 OR1L1Q8NH94 360 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 FIBINQ8TAL6 211 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 MARC2Q969Z3 335 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 FBXO6Q9NRD1 293 aaPredicted RBP3.02□□□□□ -1.93
CSMD3-202ENST00000339701 HCFC1R1Q9NWW0 138 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 RABAC1Q9UI14 185 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ADAMTS6Q9UKP5 1117 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 TMED3Q9Y3Q3 217 aa3.02□□□□□ -1.93
CSMD3-202ENST00000339701 ROS1P08922 2347 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TRBV11-1A0A0K0K1C0 115 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SMAD7O15105 426 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 NPPBP16860 134 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 PAFAH1B2P68402 229 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 OR8B8Q15620 311 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SSX7Q7RTT5 188 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 VTCN1Q7Z7D3 282 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF649Q9BS31 505 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 PECRQ9BY49 303 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 UTS2RQ9UKP6 389 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 KCNK6Q9Y257 313 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 V9GY05 133 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SPAARA0A1B0GVQ0 90 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 PRSS38A1L453 326 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 MCRIP1C9JLW8 97 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM262E9PQX1 116 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 AQP7O14520 342 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 IGHG1P01857 330 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ADRB2P07550 413 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ADRB1P08588 477 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ST6GAL1P15907 406 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 P2RY2P41231 377 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 MEOX2P50222 304 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SUMO1P63165 101 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SELENOWP63302 87 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 EGR3Q06889 387 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 PJVKQ0ZLH3 352 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 NFATC4Q14934 902 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TEX30Q5JUR7 227 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 CPZQ66K79 652 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 STEAP4Q687X5 459 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 MRGPREQ86SM8 312 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SPPL2CQ8IUH8 684 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 FRMD1Q8N878 549 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 C2CD4AQ8NCU7 369 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM158Q8WZ71 300 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 HRASLS5Q96KN8 279 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ABHD1Q96SE0 405 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TEX101Q9BY14 249 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 NMNAT2Q9BZQ4 307 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 C20orf27Q9GZN8 174 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ZBP1Q9H171 429 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 COQ10BQ9H8M1 238 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 C14orf119Q9NWQ9 140 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 CACNG2Q9Y698 323 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TRBV9A0A0B4J1U6 114 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TCRBV16S1A1N1A0A5B0 115 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 HMSDA8MTL9 139 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 KDM4EB2RXH2 506 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ICMTO60725 284 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ALOX12BO75342 701 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ALX3O95076 343 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 APOA2P02652 100 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 EPHA1P21709 976 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 LIPAP38571 399 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 HNRNPA3P51991 378 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 HYAL2Q12891 473 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 KIAA0141Q14154 515 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 INPP5JQ15735 1006 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 HFEQ30201 348 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 VASNQ6EMK4 673 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 WBP2NLQ6ICG8 309 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 NHLRC1Q6VVB1 395 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TMPRSS11FQ6ZWK6 438 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 FAM219AQ8IW50 185 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 GALNT16Q8N428 558 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 LSMEM1Q8N8F7 131 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms