RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 NXPE1Q8N323 547 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ACOT4Q8N9L9 421 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 OR5T3Q8NGG3 340 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 OR9A4Q8NGU2 314 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 RNASEH2CQ8TDP1 164 aaKnown RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 WFIKKN2Q8TEU8 576 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ZG16BQ96DA0 208 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 COX14Q96I36 57 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 PDCD1LG2Q9BQ51 273 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ZFYVE1Q9HBF4 777 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 SGK2Q9HBY8 427 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 CRLF2Q9HC73 371 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 BCL2L10Q9HD36 194 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 CRLS1Q9UJA2 301 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 POMT1Q9Y6A1 747 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 CELSR1Q9NYQ6 3014 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 GNG14A0A1W2PPG7 69 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 NPIPB15A6NHN6 443 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 H7C1Q1 480 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 J3QLW9 94 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 FOXE1O00358 373 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 SLC16A5O15375 505 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 SOCS5O75159 536 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 LYPD3O95274 346 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 LINC00614P0C842 121 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 MPC1LP0DKB6 136 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF19P17023 458 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 GPR4P46093 362 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 RABIFP47224 123 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 RGS8P57771 180 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 NANOS3P60323 173 aaKnown RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 RPP30P78346 268 aaKnown RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 MRPS21P82921 87 aaKnown RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 IRF8Q02556 426 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 LRRC37A5PQ49AS3 106 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 DCAF10Q5QP82 559 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF684Q5T5D7 378 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 TMEM268Q5VZI3 342 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 SP5Q6BEB4 398 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 OR2A2Q6IF42 318 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 GALNT16Q8N428 558 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 OR2A12Q8NGT7 310 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 FLVCR1-AS1Q8TAF5 88 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 DTD1Q8TEA8 209 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ZNRF4Q8WWF5 429 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ASB17Q8WXJ9 295 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 DVL3Q92997 716 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 S100A16Q96FQ6 103 aaKnown RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 WDR92Q96MX6 357 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 PRSS27Q9BQR3 290 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 SLC5A7Q9GZV3 580 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 UBQLN4Q9NRR5 601 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ATG4BQ9Y4P1 393 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 TDRD6O60522 2096 aaKnown RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 OR2AG2A6NM03 316 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ADAP1O75689 374 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 CSF1P09603 554 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 C6P13671 934 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ITPKBP27987 946 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 PYCR1P32322 319 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 PTSQ03393 145 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 KIAA0141Q14154 515 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ELOBQ15370 118 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 TAF13Q15543 124 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 DECR1Q16698 335 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ISXQ2M1V0 245 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ACTBL2Q562R1 376 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 YOD1Q5VVQ6 348 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-202ENST00000339438 WDR88Q6ZMY6 472 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 Q6ZVL8 140 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 OR2L13Q8N349 312 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 BPIFB2Q8N4F0 458 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 OR2T33Q8NG76 320 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 OR2L5Q8NG80 312 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 GPX8Q8TED1 209 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 TMEM255BQ8WV15 326 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 C3orf49Q96BT1 292 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 S100PBPQ96BU1 408 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 HIST1H2BLQ99880 126 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 SULT4A1Q9BR01 284 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 RAB33BQ9H082 229 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 SLC25A18Q9H1K4 315 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 PCED1AQ9H1Q7 454 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ASCL3Q9NQ33 180 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 PARP11Q9NR21 331 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 VSIG4Q9Y279 399 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 TMED3Q9Y3Q3 217 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 ADAM18Q9Y3Q7 739 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 KPTNQ9Y664 436 aa5.02□□□□□ -1.61
CSDE1-202ENST00000339438 OR5H15A6NDH6 313 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 OR5H1A6NKK0 313 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 TSTD3H0UI37 97 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 SAP18O00422 153 aaKnown RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 TBX19O60806 448 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 CTAG2O75638 210 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 MRPL3P09001 348 aaKnown RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 BMP7P18075 431 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 SULT1A2P50226 295 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 NPY4RP50391 375 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 IL15RAQ13261 267 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms