RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SEMA5BQ9P283 1151 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 TRAV18A0A075B6X5 111 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 TRBV5-7A0A0A0MS05 114 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 SCDO00767 359 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 GLCEO94923 617 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 IL33O95760 270 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 PRSS3P35030 304 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 AKR1C2P52895 323 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 AKR1C1Q04828 323 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 LIPNQ5VXI9 398 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 MAML2Q8IZL2 1156 aaPredicted RBP16.87■□□□□ 0.29
PSPC1-201ENST00000338910 OR51D1Q8NGF3 324 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 SAP25Q8TEE9 199 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF501Q96CX3 271 aaPredicted RBP16.87■□□□□ 0.29
PSPC1-201ENST00000338910 UPB1Q9UBR1 384 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 MRM2Q9UI43 246 aaKnown RBP16.87■□□□□ 0.29
PSPC1-201ENST00000338910 ARPC4-TTLL3A0A0A6YYG9 625 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 WNT11O96014 354 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 RPL4P36578 427 aaKnown RBP16.86■□□□□ 0.29
PSPC1-201ENST00000338910 SSBP1Q04837 148 aaKnown RBP16.86■□□□□ 0.29
PSPC1-201ENST00000338910 ELAVL1Q15717 326 aaKnown RBP16.86■□□□□ 0.29
PSPC1-201ENST00000338910 BEX5Q5H9J7 111 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 C10orf91Q5T1B1 145 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 DPY19L2P2Q6ZN68 376 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 GABRG1Q8N1C3 465 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 LINC00469Q8N7U9 141 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 ADIPOR1Q96A54 375 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 RASD2Q96D21 266 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 KLHDC3Q9BQ90 382 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 RXFP3Q9NSD7 469 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 KLHDC2Q9Y2U9 406 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 A0A1B0GX78 115 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 OR14I1A6ND48 311 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 FAM171A2A8MVW0 826 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 ARPC3O15145 178 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 CFIP05156 583 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 TACSTD2P09758 323 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF574Q6ZN55 896 aaPredicted RBP16.86■□□□□ 0.29
PSPC1-201ENST00000338910 ACOT7LQ6ZUV0 252 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 GPX8Q8TED1 209 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF524Q96C55 264 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 ALG12Q9BV10 488 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 DUSP23Q9BVJ7 150 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 GAREM1Q9H706 876 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 MYOZ1Q9NP98 299 aaPredicted RBP16.86■□□□□ 0.29
PSPC1-201ENST00000338910 ASF1BQ9NVP2 202 aa16.86■□□□□ 0.29
PSPC1-201ENST00000338910 ABHD16AO95870 558 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 CFPP27918 469 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 NR0B1P51843 470 aaKnown RBP16.85■□□□□ 0.29
PSPC1-201ENST00000338910 FNDC7Q5VTL7 733 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 LPCAT3Q6P1A2 487 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 FAM220AQ7Z4H9 259 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 TMED4Q7Z7H5 227 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 SPAG16Q8N0X2 631 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF511Q8NB15 262 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 DMBX1Q8NFW5 382 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 OR2I1PQ8NGU4 316 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF417Q8TAU3 575 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 GLYATL2Q8WU03 294 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 NECAB3Q96P71 396 aaPredicted RBP16.85■□□□□ 0.29
PSPC1-201ENST00000338910 SLC25A21Q9BQT8 299 aaPredicted RBP16.85■□□□□ 0.29
PSPC1-201ENST00000338910 RTN4RQ9BZR6 473 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 VN1R1Q9GZP7 353 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 SUSD2Q9UGT4 822 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 CARHSP1Q9Y2V2 147 aaKnown RBP16.85■□□□□ 0.29
PSPC1-201ENST00000338910 LY6G6EA0A0G2JKS1 128 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 TMEM72A0PK05 275 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 FRG2CA6NGY1 282 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 ELOA3DA6NLF2 546 aaPredicted RBP16.85■□□□□ 0.29
PSPC1-201ENST00000338910 SPP1P10451 314 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 DLSTP36957 453 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 POU3F4P49335 361 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 SKP2Q13309 424 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 ELOA3BQ3SY89 546 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 C9orf40Q8IXQ3 194 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 ELOA3Q8NG57 546 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 OR1J2Q8NGS2 313 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 OR10AC1Q8NH08 325 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 WNT2BQ93097 391 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 TMEM106AQ96A25 262 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 POTEKPQ9BYX7 375 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF629Q9UEG4 869 aaPredicted RBP16.85■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF346Q9UL40 294 aaKnown RBP16.85■□□□□ 0.29
PSPC1-201ENST00000338910 U3KQA8 63 aa16.85■□□□□ 0.29
PSPC1-201ENST00000338910 FER1L5A0AVI2 2057 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 ADAMTS9Q9P2N4 1935 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 A0A1B0GTH9 108 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 C17orf51A8MQB3 221 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF264O43296 627 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 ICOSLGO75144 302 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 ACTBP60709 375 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 ACTG1P63261 375 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 DHRS2Q13268 280 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 NR0B2Q15466 257 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 TAF13Q15543 124 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 HLA-DQA1Q5Y7H0 255 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 WBP2NLQ6ICG8 309 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF813Q6ZN06 617 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 LANCL3Q6ZV70 420 aa16.84■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF440Q8IYI8 595 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms