RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 LYNX1P0DP58 116 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 NR4A2P43354 598 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 HTR5AP47898 357 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 GK3PQ14409 553 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 CARTPTQ16568 116 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 TMEM249Q2WGJ8 235 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 DNM1P34Q6PK57 102 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 CORO6Q6QEF8 472 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.04□□□□□ -0.32
PRKN-201ENST00000338468 SPATA24Q86W54 205 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 HS3ST5Q8IZT8 346 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 ZNF786Q8N393 782 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 OR52L1Q8NGH7 329 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 ABHD4Q8TB40 342 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 KLF14Q8TD94 323 aaPredicted RBP13.04□□□□□ -0.32
PRKN-201ENST00000338468 UBASH3BQ8TF42 649 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 GIPC3Q8TF64 312 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 C4orf45Q96LM5 186 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 FEVQ99581 238 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 TSSK6Q9BXA6 273 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 OR2J1Q9GZK6 312 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 POFUT1Q9H488 388 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 MRPL22Q9NWU5 206 aaKnown RBP13.04□□□□□ -0.32
PRKN-201ENST00000338468 PLEK2Q9NYT0 353 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 EIF3KQ9UBQ5 218 aaKnown RBP13.04□□□□□ -0.32
PRKN-201ENST00000338468 NDRG4Q9ULP0 352 aaKnown RBP13.04□□□□□ -0.32
PRKN-201ENST00000338468 IGHV4-61A0A0C4DH41 118 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 FKBP6O75344 327 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 GSTM3P21266 225 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 USF1P22415 310 aaPredicted RBP13.03□□□□□ -0.32
PRKN-201ENST00000338468 GIFP27352 417 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 PYCR1P32322 319 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 GGT2P36268 569 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 MAGEB1P43366 347 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 CENPAP49450 140 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 PPP1CBP62140 327 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 TEKQ02763 1124 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 COX10Q12887 443 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 RIN1Q13671 783 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 RSPO1Q2MKA7 263 aaPredicted RBP13.03□□□□□ -0.32
PRKN-201ENST00000338468 MBNL2Q5VZF2 373 aaKnown RBP13.03□□□□□ -0.32
PRKN-201ENST00000338468 SLC37A3Q8NCC5 494 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 OR1F12Q8NHA8 337 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 IPCEF1Q8WWN9 437 aaPredicted RBP13.03□□□□□ -0.32
PRKN-201ENST00000338468 TMEM158Q8WZ71 300 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 PIMREGQ9BSJ6 248 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 RBM4Q9BWF3 364 aaKnown RBP13.03□□□□□ -0.32
PRKN-201ENST00000338468 BPESC1Q9GZL8 116 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 NTN4Q9HB63 628 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 TBC1D23Q9NUY8 699 aa13.03□□□□□ -0.32
PRKN-201ENST00000338468 C17orf100A8MU93 164 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 CD5LO43866 347 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 ERCC1P07992 297 aaPredicted RBP13.02□□□□□ -0.33
PRKN-201ENST00000338468 DBHP09172 617 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 PSKH1P11801 424 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 HOXB6P17509 224 aaKnown RBP13.02□□□□□ -0.33
PRKN-201ENST00000338468 COL8A2P25067 703 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 MMP15P51511 669 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 CBX1P83916 185 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 GLO1Q04760 184 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 NKPD1Q17RQ9 610 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 KRTAP27-1Q3LI81 207 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 ZNF718Q3SXZ3 478 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 SLC36A3Q495N2 470 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 SLC18B1Q6NT16 456 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 LYPD4Q6UWN0 246 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 CFAP77Q6ZQR2 320 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 YIPF5Q969M3 257 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 NMNAT2Q9BZQ4 307 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 ELOVL3Q9HB03 270 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 HINT3Q9NQE9 182 aaKnown RBP13.02□□□□□ -0.33
PRKN-201ENST00000338468 TBCCD1Q9NVR7 557 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 SLCO1C1Q9NYB5 712 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 PDP1Q9P0J1 537 aaPredicted RBP13.02□□□□□ -0.33
PRKN-201ENST00000338468 CYB5R1Q9UHQ9 305 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 ATPIF1Q9UII2 106 aa13.02□□□□□ -0.33
PRKN-201ENST00000338468 H3BSA7 217 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 ABHD16AO95870 558 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 PRKACGP22612 351 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 SELENOVP59797 346 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 CRMP1Q14194 572 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 GGTLC2Q14390 218 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 LINC00346Q8IVM7 164 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 C1orf174Q8IYL3 243 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 IQCF1Q8N6M8 205 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 GJC3Q8NFK1 279 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 OR2T33Q8NG76 320 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 OR51L1Q8NGJ5 315 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 OR9Q1Q8NGQ5 310 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 UTP4Q969X6 686 aaKnown RBP13.01□□□□□ -0.33
PRKN-201ENST00000338468 PNRC2Q9NPJ4 139 aaKnown RBP13.01□□□□□ -0.33
PRKN-201ENST00000338468 DNAJB9Q9UBS3 223 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 KLHL21Q9UJP4 597 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 BAIAP2Q9UQB8 552 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 POLR1DQ9Y2S0 133 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 STARD10Q9Y365 291 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 GRIP1Q9Y3R0 1128 aa13.01□□□□□ -0.33
PRKN-201ENST00000338468 ZSCAN5BA6NJL1 495 aa13□□□□□ -0.33
PRKN-201ENST00000338468 GNGT2O14610 69 aa13□□□□□ -0.33
PRKN-201ENST00000338468 LILRA1O75019 489 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms