RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SEMA6DQ8NFY4 1073 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 OR5M1Q8NGP8 315 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 UCN3Q969E3 161 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 MRGPRX1Q96LB2 322 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 UTP23Q9BRU9 249 aaKnown RBP12.51□□□□□ -0.41
RTN4-202ENST00000337526 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
RTN4-202ENST00000337526 ZNF814B7Z6K7 855 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 SDCBPO00560 298 aaPredicted RBP12.51□□□□□ -0.41
RTN4-202ENST00000337526 TPPPO94811 219 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 PRSS23O95084 383 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 GUSBP08236 651 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 QDPRP09417 244 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 CRYBB2P43320 205 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 PLGLAQ15195 96 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 STT3BQ8TCJ2 826 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 JAM3Q9BX67 310 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 MED29Q9NX70 200 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 CXorf51AA0A1B0GTR3 108 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 TRIM64BA6NI03 449 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 ICOSLGO75144 302 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 OR4E1P0C645 316 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 LIMS3P0CW19 117 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 LIMS4P0CW20 117 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 EMDP50402 254 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 CDK5Q00535 292 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 SSX1Q16384 188 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 ARSJQ5FYB0 599 aaPredicted RBP12.5□□□□□ -0.41
RTN4-202ENST00000337526 AGBL4Q5VU57 503 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 KIRREL1Q96J84 757 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 VAMP5O95183 116 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 FKBP2P26885 142 aaKnown RBP12.5□□□□□ -0.41
RTN4-202ENST00000337526 PTGER4P35408 488 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 MMP15P51511 669 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 MCCD1P59942 119 aaPredicted RBP12.5□□□□□ -0.41
RTN4-202ENST00000337526 GPR85P60893 370 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 PDZK1IP1Q13113 114 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 NLRC3Q7RTR2 1065 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 ZFP82Q8N141 532 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 ZG16BQ96DA0 208 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 LIN37Q96GY3 246 aaPredicted RBP12.5□□□□□ -0.41
RTN4-202ENST00000337526 CTSFQ9UBX1 484 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 ECM29Q5VYK3 1845 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 ARGFXA6NJG6 315 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 PI3P19957 117 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 PCMT1P22061 227 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 TNFSF4P23510 183 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 MLF2Q15773 248 aaPredicted RBP12.5□□□□□ -0.41
RTN4-202ENST00000337526 SSX2Q16385 188 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 KCNIP4Q6PIL6 250 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 C17orf107Q6ZR85 190 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 DMBX1Q8NFW5 382 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 OR13C8Q8NGS7 320 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 OR6K3Q8NGY3 331 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 ATOH1Q92858 354 aaPredicted RBP12.5□□□□□ -0.41
RTN4-202ENST00000337526 ALG14Q96F25 216 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 TXNIPQ9H3M7 391 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 ZCCHC4Q9H5U6 513 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 SLC5A6Q9Y289 635 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 PCYT1BQ9Y5K3 369 aaPredicted RBP12.5□□□□□ -0.41
RTN4-202ENST00000337526 HRH3Q9Y5N1 445 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 A0A1W2PNR3 127 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 BCKDHBP21953 392 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 SNCAP37840 140 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 FAM53BQ14153 422 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 PCK2Q16822 640 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 MRPL41Q8IXM3 137 aaKnown RBP12.5□□□□□ -0.41
RTN4-202ENST00000337526 MSI2Q96DH6 328 aaKnown RBP12.5□□□□□ -0.41
RTN4-202ENST00000337526 GAREM1Q9H706 876 aa12.5□□□□□ -0.41
RTN4-202ENST00000337526 OR2W5A6NFC9 320 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 H0YIG0 161 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 FOLR1P15328 257 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 RPA2P15927 270 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 RBP2P50120 134 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 TMEM196Q5HYL7 178 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 ZNF793Q6ZN11 406 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 ZNF610Q8N9Z0 462 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 OR10Z1Q8NGY1 313 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 SFT2D1Q8WV19 159 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 WDFY2Q96P53 400 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 ARHGDIGQ99819 225 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 NKX6-2Q9C056 277 aaPredicted RBP12.49□□□□□ -0.41
RTN4-202ENST00000337526 GPR84Q9NQS5 396 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 HSPB2A8KAH6 182 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 ZNF587BE7ETH6 402 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 NXPH2O95156 264 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 IGHEP01854 428 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 CD80P33681 288 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 EMP3P54852 163 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 HSPB2Q16082 182 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 OR4C16Q8NGL9 310 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 OR52N5Q8NH56 324 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 CDCP1Q9H5V8 836 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 SIGLEC7Q9Y286 467 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 JTBO76095 146 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 HPNP05981 417 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 ADRB1P08588 477 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 RPS2P15880 293 aaKnown RBP12.49□□□□□ -0.41
RTN4-202ENST00000337526 F2RL1P55085 397 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 TESK1Q15569 626 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms