RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 VASH1Q7L8A9 365 aaPredicted RBP11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 SSX8Q7RTT4 187 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 SSX6Q7RTT6 188 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 LHFPL3Q86UP9 236 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 CPEB3Q8NE35 698 aaKnown RBP11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 OR10S1Q8NGN2 331 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 ASB17Q8WXJ9 295 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 SLAMF6Q96DU3 332 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 ZNF75AQ96N20 296 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 TTTY10Q9BZA0 68 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 PNRC2Q9NPJ4 139 aaKnown RBP11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 INPP5EQ9NRR6 644 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 CENPMQ9NSP4 180 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 ERVK-18Q9QC07 812 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 RTTNQ86VV8 2226 aa11.94□□□□□ -0.5
TUBA1B-202ENST00000336023 PRR32B1ATL7 298 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 C19orf84I3L1E1 186 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 PHYHO14832 338 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 DOK2O60496 412 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 IGKV3-15P01624 115 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 PAX7P23759 505 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 IDH3GP51553 393 aaPredicted RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 ZNF85Q03923 595 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 PLP2Q04941 152 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 RAB35Q15286 201 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 WFDC8Q8IUA0 241 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 ZNF584Q8IVC4 421 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 FAM169BQ8N8A8 192 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 OR1F12Q8NHA8 337 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 RNF133Q8WVZ7 376 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 ZNF649Q9BS31 505 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 JAM3Q9BX67 310 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 MOV10Q9HCE1 1003 aaKnown RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 ERVK13-1Q9NX77 482 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 CRNNQ9UBG3 495 aaPredicted RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 KLF2Q9Y5W3 355 aaPredicted RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 GCN1Q92616 2671 aaKnown RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 USP9YO00507 2555 aaPredicted RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 IQCMA0A1B0GVH7 501 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 OR6C6A6NF89 314 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 PSMD9O00233 223 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 RGS10O43665 173 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 SYNGR3O43761 229 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 SERPINA5P05154 406 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 CELA3BP08861 270 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 LIMS3P0CW19 117 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 LIMS4P0CW20 117 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 ZNF14P17017 642 aaPredicted RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 MYL12AP19105 171 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 APEX1P27695 318 aaKnown RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 HTR5AP47898 357 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 ETV1P50549 477 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 ZNF83P51522 516 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 GABARAPL2P60520 117 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 ROM1Q03395 351 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 GALEQ14376 348 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 KCTD18Q6PI47 426 aaPredicted RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 SEZ6L2Q6UXD5 910 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 LRRN1Q6UXK5 716 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 RHOUQ7L0Q8 258 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 SNX33Q8WV41 574 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 ATF6BQ99941 703 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 HDHD2Q9H0R4 259 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 DDX28Q9NUL7 540 aaKnown RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 CHCHD3Q9NX63 227 aaKnown RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 SLCO1C1Q9NYB5 712 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 NPAP1Q9NZP6 1156 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 CLEC2DQ9UHP7 191 aa11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 EXOSC1Q9Y3B2 195 aaKnown RBP11.93□□□□□ -0.5
TUBA1B-202ENST00000336023 ZNF878C9JN71 531 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 MAGEB4O15481 346 aaPredicted RBP11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 TNFAIP8O95379 198 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 IGLV1-44P01699 117 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 STOMP27105 288 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 PEX19P40855 299 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 OPRL1P41146 370 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 EGR3Q06889 387 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 ECH1Q13011 328 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 TAF13Q15543 124 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 KCTD21Q4G0X4 260 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 KRT77Q7Z794 578 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 MYPOPQ86VE0 399 aaPredicted RBP11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 ZNF679Q8IYX0 411 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 SLC7A6Q92536 515 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 DACH2Q96NX9 599 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 OR8B4Q96RC9 309 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 NR1H4Q96RI1 486 aaPredicted RBP11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 SIGLEC11Q96RL6 698 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 COQ7Q99807 217 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 ALG8Q9BVK2 526 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 MROQ9BYG7 248 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 CCDC90BQ9GZT6 254 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 IKZF2Q9UKS7 526 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 FBXL3Q9UKT7 428 aa11.92□□□□□ -0.5
TUBA1B-202ENST00000336023 LOC100509620A0A075B734 347 aa11.91□□□□□ -0.5
TUBA1B-202ENST00000336023 IGHV1-18A0A0C4DH31 117 aa11.91□□□□□ -0.5
TUBA1B-202ENST00000336023 M0R1B8 84 aa11.91□□□□□ -0.5
TUBA1B-202ENST00000336023 PTHP01270 115 aa11.91□□□□□ -0.5
TUBA1B-202ENST00000336023 MT-ND2P03891 347 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms