RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 NAAAQ02083 359 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 ZNF91Q05481 1191 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 POU4F2Q12837 409 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 TBC1D28Q2M2D7 210 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 SLC35F2Q8IXU6 374 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 ZNF295-AS1Q8N0V1 137 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 ZNF454Q8N9F8 522 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 IL17RDQ8NFM7 739 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 OR1J2Q8NGS2 313 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 OTOSQ8NHW6 89 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 ST7LQ8TDW4 575 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 FBLIM1Q8WUP2 373 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 THEM6Q8WUY1 208 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 MARVELD3Q96A59 401 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 SLAMF6Q96DU3 332 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 RADILQ96JH8 1075 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 ABHD6Q9BV23 337 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 ANKRD60Q9BZ19 345 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 HDHD2Q9H0R4 259 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 CDH20Q9HBT6 801 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 AMBNQ9NP70 447 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 CENPMQ9NSP4 180 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 LAMP5Q9UJQ1 280 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 RPL36Q9Y3U8 105 aaKnown RBP12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 RNF115Q9Y4L5 304 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 ANKHD1Q8IWZ3 2542 aaKnown RBP12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 SPTAN1Q13813 2472 aaKnown RBP12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 LOC100509620A0A075B734 347 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 IGHV2OR16-5A0A0B4J2B6 119 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 C5orf49A4QMS7 147 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 OR6C6A6NF89 314 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 CTAG2O75638 210 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 CRYAAP02489 173 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 LYNP07948 512 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 CCNOP22674 350 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 LAIR2Q6ISS4 152 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 ADAM5Q6NVV9 412 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 SLC22A25Q6T423 547 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 SPATC1Q76KD6 591 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 PAQR4Q8N4S7 273 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 OR4F15Q8NGB8 312 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 OR10S1Q8NGN2 331 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 SLC7A6Q92536 515 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 POM121L2Q96KW2 1035 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 CNBD2Q96M20 576 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 AMELYQ99218 206 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 COQ7Q99807 217 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 ATF6BQ99941 703 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 TMEM204Q9BSN7 226 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 PNRC2Q9NPJ4 139 aaKnown RBP12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 COPS3Q9UNS2 423 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 KLHDC2Q9Y2U9 406 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 TMEM14AQ9Y6G1 99 aa12.2□□□□□ -0.46
APOBEC3B-202ENST00000335760 FAM221AA4D161 298 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF670-ZNF695F2Z2N8 137 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 ATP6V1G2-DDX39BF2Z307 99 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 PLAUP00749 431 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF35P13682 527 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 ALOX5APP20292 161 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 TLE4Q04727 773 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 ECH1Q13011 328 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 TAF13Q15543 124 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF704Q6ZNC4 412 aaPredicted RBP12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 KBTBD8Q8NFY9 601 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 OR10H4Q8NGA5 316 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 LGALS12Q96DT0 336 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 MNTQ99583 582 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 TBX5Q99593 518 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 COPS4Q9BT78 406 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 Q9H521 79 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 EXOGQ9Y2C4 368 aaKnown RBP12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 ATP23Q9Y6H3 246 aa12.19□□□□□ -0.46
APOBEC3B-202ENST00000335760 SHISA9B4DS77 424 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 ZNF878C9JN71 531 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 DBHP09172 617 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 OR2T7P0C7T2 308 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 GALK2Q01415 458 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 HGFACQ04756 655 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 TMEM200AQ86VY9 491 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 RFLNBQ8N5W9 214 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 BPIFB6Q8NFQ5 453 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 OR2T27Q8NH04 317 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 RNF133Q8WVZ7 376 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 ASB17Q8WXJ9 295 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 NEUROG1Q92886 237 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 C14orf79Q96F83 325 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 TTTY10Q9BZA0 68 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 DDX28Q9NUL7 540 aaKnown RBP12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 ATPIF1Q9UII2 106 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 POU2F3Q9UKI9 436 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 PKDREJQ9NTG1 2253 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 A0A1W2PQL4 384 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 F5H5K5 113 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 PHYHO14832 338 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 XPNPEP2O43895 674 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 FAM20BO75063 409 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 H2BFMP0C1H6 154 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 SSTR2P30874 369 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 OPRL1P41146 370 aa12.18□□□□□ -0.46
APOBEC3B-202ENST00000335760 CXCR4P61073 352 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms