RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 A6NCN8 305 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ABCD4O14678 606 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 GASTP01350 101 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 FPR3P25089 353 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 KIR2DS3Q14952 304 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 GGTA1PQ4G0N0 100 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF765Q7L2R6 523 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 MMP21Q8N119 569 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 MTMR14Q8NCE2 650 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 CMBLQ96DG6 245 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 C5AR2Q9P296 337 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 AQP7P3A6NL99 342 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 PIRO00625 290 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 PEX10O60683 326 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 SEMA7AO75326 666 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 SAXO2Q658L1 398 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 GLIPR1L1Q6UWM5 242 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF738Q8NE65 137 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 OR51B6Q9H340 312 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ARNT2Q9HBZ2 717 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 A4GALTQ9NPC4 353 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ENTPD2Q9Y5L3 495 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 LAMB2P55268 1798 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ARPC3O15145 178 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 AIFM1O95831 613 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 LGI1O95970 557 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ABHD17BQ5VST6 288 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF343Q6P1L6 599 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 HSD17B13Q7Z5P4 300 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 UBALD1Q8TB05 177 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 IRF7Q92985 503 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 TCTN2Q96GX1 697 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 BOCQ9BWV1 1114 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 BOKQ9UMX3 212 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM238LA0A1B0GVL6 79 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 A6NJY4 79 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 MISPQ8IVT2 679 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 NEURL3Q96EH8 262 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 C2orf50Q96LR7 162 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM191AQ9H0A3 160 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 SHARPINQ9H0F6 387 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 A0A0G2JLL6 359 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 A0A1B0GTQ1 180 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM218A2RU14 115 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 FCN1O00602 326 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 GLCEO94923 617 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 HTR5AP47898 357 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 DHODHQ02127 395 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 OR8B8Q15620 311 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 TOMM34Q15785 309 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 MRPL2Q5T653 305 aaKnown RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 LCN15Q6UWW0 184 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 SLC16A14Q7RTX9 510 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 PRRT2Q7Z6L0 340 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ARRDC2Q8TBH0 407 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 BCL2L2Q92843 193 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 RAB24Q969Q5 203 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 BARHL1Q9BZE3 327 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 MARCH4Q9P2E8 410 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 NXT1Q9UKK6 140 aaKnown RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 FREM1Q5H8C1 2179 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ALDOCP09972 364 aaKnown RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 SMPD1P17405 629 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ACHEP22303 614 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 BSGP35613 385 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 RABIFP47224 123 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 DAPP51397 102 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 HIST3H3Q16695 136 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 DND1Q8IYX4 353 aaKnown RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ANKLE1Q8NAG6 615 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 SLC38A9Q8NBW4 561 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 BCL7CQ8WUZ0 217 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM184BQ9Y519 407 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ANK1P16157 1881 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 DUXBA0A1W2PPF3 345 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 LEFTY2O00292 366 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 LY86O95711 162 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 SELEP16581 610 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ALOX5APP20292 161 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ABCD3P28288 659 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 GZMKP49863 264 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 GABREP78334 506 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 MFSD12Q6NUT3 480 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 MED20Q9H944 212 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 ING1Q9UK53 422 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 FRS3O43559 492 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 NXPH3O95157 252 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 HIST1H1TP22492 207 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 CD1CP29017 333 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 FOLR3P41439 243 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 PNRC1Q12796 327 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 HLXQ14774 488 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 BPIFA4PQ86YQ2 179 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 EDEM2Q9BV94 578 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 AAMDCQ9H7C9 122 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM265A0A087WTH1 108 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 SGK494L7N484 410 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 OR5AL1P0C617 328 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 MMP15P51511 669 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 UBE2MP61081 183 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms