RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 KANTRA0A1W2PQU2 76 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 C1orf196B1AJZ1 125 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 DOK2O60496 412 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 CDC40O60508 579 aaKnown RBP eCLIP12.5□□□□□ -0.411e-8■□□□□ 10.6
SF1-202ENST00000334944 S100A8P05109 93 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 NDUFB7P17568 137 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 P2RX1P51575 399 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 TDGQ13569 410 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 LINC01590Q5TEZ4 76 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 SLC29A4Q7RTT9 530 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 CLCC1Q96S66 551 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 GAL3ST1Q99999 423 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 FBXL3Q9UKT7 428 aa12.5□□□□□ -0.41
SF1-202ENST00000334944 COLCA2A8K830 154 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 NDUFB6O95139 128 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 MGMTP16455 207 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 DEFA6Q01524 100 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 TMEM69Q5SWH9 247 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 CHRDL2Q6WN34 429 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 ZNF565Q8N9K5 539 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 OR10R2Q8NGX6 335 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 OR10AC1Q8NH08 325 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 RGP1Q92546 391 aaPredicted RBP12.49□□□□□ -0.41
SF1-202ENST00000334944 SLITRK2Q9H156 845 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 FBXO4Q9UKT5 387 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 CCDC85CA6NKD9 419 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 F5H0A9 414 aaPredicted RBP12.49□□□□□ -0.41
SF1-202ENST00000334944 GSTZ1O43708 216 aaPredicted RBP12.49□□□□□ -0.41
SF1-202ENST00000334944 DDAH2O95865 285 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 UBBP0CG47 229 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 UBCP0CG48 685 aaKnown RBP12.49□□□□□ -0.41
SF1-202ENST00000334944 APEHP13798 732 aaKnown RBP12.49□□□□□ -0.41
SF1-202ENST00000334944 PSMD4P55036 377 aaKnown RBP12.49□□□□□ -0.41
SF1-202ENST00000334944 CASP6P55212 293 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 OR2B8PP59922 312 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 SSTP61278 116 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 RPS27AP62979 156 aaKnown RBP12.49□□□□□ -0.41
SF1-202ENST00000334944 UBA52P62987 128 aaKnown RBP12.49□□□□□ -0.41
SF1-202ENST00000334944 GUCA2AQ02747 115 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 POU4F2Q12837 409 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.49□□□□□ -0.41
SF1-202ENST00000334944 C14orf28Q4W4Y0 310 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 FAM199XQ6PEV8 388 aaPredicted RBP12.49□□□□□ -0.41
SF1-202ENST00000334944 SLC35D2Q76EJ3 337 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 DPY19L4Q7Z388 723 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 C9orf40Q8IXQ3 194 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 OR6N2Q8NGY6 317 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 ADAD1Q96M93 576 aaKnown RBP12.49□□□□□ -0.41
SF1-202ENST00000334944 RXFP3Q9NSD7 469 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 MBD2Q9UBB5 411 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 RTTNQ86VV8 2226 aa12.49□□□□□ -0.41
SF1-202ENST00000334944 OR14I1A6ND48 311 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 OGG1O15527 345 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 ZNF217O75362 1048 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 GAAP10253 952 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 DAOP14920 347 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 MUC1P15941 1255 aaPredicted RBP12.48□□□□□ -0.41
SF1-202ENST00000334944 ABCD3P28288 659 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 RPS4XP62701 263 aaKnown RBP12.48□□□□□ -0.41
SF1-202ENST00000334944 ACTA2P62736 377 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 ACTG2P63267 376 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 TSC22D1Q15714 1073 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 PCGF3Q3KNV8 242 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 JMJD6Q6NYC1 403 aaPredicted RBP12.48□□□□□ -0.41
SF1-202ENST00000334944 BEST3Q8N1M1 668 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 POMGNT2Q8NAT1 580 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 SYNPRQ8TBG9 265 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 ZDHHC12Q96GR4 267 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 GFI1Q99684 422 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 NUDT22Q9BRQ3 303 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 OR11A1Q9GZK7 315 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 SLC2A4RGQ9NR83 387 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 GRHPRQ9UBQ7 328 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 GTF2A1LQ9UNN4 478 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 LMO7DNF2Z398 122 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 FBP1P09467 338 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 RPA2P15927 270 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 ZNF14P17017 642 aaPredicted RBP12.48□□□□□ -0.41
SF1-202ENST00000334944 GALP22466 123 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 CDK2P24941 298 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 IL12BP29460 328 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 P2RY4P51582 365 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 DCDP81605 110 aaKnown RBP12.48□□□□□ -0.41
SF1-202ENST00000334944 MESTQ5EB52 335 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 FNDC7Q5VTL7 733 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 LIPNQ5VXI9 398 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 OR52W1Q6IF63 320 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 FAM219AQ8IW50 185 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 OR51A4Q8NGJ6 313 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 OR51S1Q8NGJ8 323 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 ZNF721Q8TF20 911 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 TSPAN32Q96QS1 320 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 AMELYQ99218 206 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 FSCN3Q9NQT6 498 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 PCDHGA1Q9Y5H4 931 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 FREM3P0C091 2139 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 ANKRD20A5PA0PJZ0 165 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 CPED1A4D0V7 1026 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 LILRA5A6NI73 299 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms