RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 EDARQ9UNE0 448 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 ETV7Q9Y603 341 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 ANKRD61A6NGH8 418 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 NFYBP25208 207 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 PTGS2P35354 604 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 PTGER4P35408 488 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 MSMO1Q15800 293 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 ADPRMQ3LIE5 342 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 SCCPDHQ8NBX0 429 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 PLPP5Q8NEB5 264 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 TMEM185AQ8NFB2 350 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 BCO1Q9HAY6 547 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 PLEKHA3Q9HB20 300 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 GLTPQ9NZD2 209 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 GDF2Q9UK05 429 aaPredicted RBP13.57□□□□□ -0.24
C9orf47-201ENST00000334490 TOR1AO14656 332 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 SPINK14Q6IE38 97 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 EGFL6Q8IUX8 553 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 OR51F2Q8NH61 342 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 AKR7LQ8NHP1 331 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 APOBEC4Q8WW27 367 aaKnown RBP13.56□□□□□ -0.24
C9orf47-201ENST00000334490 TAAR8Q969N4 342 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 ZNF681Q96N22 645 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 PLCXD1Q9NUJ7 323 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 DNAJB12Q9NXW2 375 aaKnown RBP13.56□□□□□ -0.24
C9orf47-201ENST00000334490 SLC22A13Q9Y226 551 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 FOCADQ5VW36 1801 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 SPINT2O43291 252 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 GABARAPO95166 117 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 HEXAP06865 529 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 CBLN3Q6UW01 205 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.56□□□□□ -0.24
C9orf47-201ENST00000334490 SLC22A18ASQ8N1D0 253 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 SYS1Q8N2H4 156 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 OR1M1Q8NGA1 313 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 ABHD6Q9BV23 337 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 UBQLN2Q9UHD9 624 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 POLDIP2Q9Y2S7 368 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 RNF212BA8MTL3 300 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 C21orf140B9A014 251 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 PAHP00439 452 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 RAF1P04049 648 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 CDAP32320 146 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 RAD52P43351 418 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 F2RL1P55085 397 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 NUBPLQ8TB37 319 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 SPACA5Q96QH8 159 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 RASL10BQ96S79 203 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 NKX3-1Q99801 234 aaPredicted RBP13.56□□□□□ -0.24
C9orf47-201ENST00000334490 OR6C6A6NF89 314 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 XRCC2O43543 280 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 HPP00738 406 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 CHRM2P08172 466 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 PTAFRP25105 342 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 ISXQ2M1V0 245 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 GPR155Q7Z3F1 870 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 DMBX1Q8NFW5 382 aa13.56□□□□□ -0.24
C9orf47-201ENST00000334490 EIF5A2Q9GZV4 153 aaKnown RBP13.56□□□□□ -0.24
C9orf47-201ENST00000334490 HS3ST1O14792 307 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 PRKACAP17612 351 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 CAMLGP49069 296 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 DLX5P56178 289 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 RPL23AP62750 156 aaKnown RBP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 EGR3Q06889 387 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 TMPRSS7Q7RTY8 843 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 OR10K1Q8NGX5 313 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 ANKRD9Q96BM1 317 aaPredicted RBP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 LOXL4Q96JB6 756 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 TMEM82A0PJX8 343 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 H7C1Q1 480 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 BMP5P22003 454 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 HNRNPFP52597 415 aaKnown RBP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 SLC17A1Q14916 467 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 AKR1C8PQ5T2L2 129 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 LYPD4Q6UWN0 246 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 ZNF808Q8N4W9 903 aaPredicted RBP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 GPR32P1Q8NGA4 272 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 ELMOD3Q96FG2 381 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 PPIL3Q9H2H8 161 aaKnown RBP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 CCDC86Q9H6F5 360 aaKnown RBP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 SIRT3Q9NTG7 399 aaPredicted RBP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 GFOD1Q9NXC2 390 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 NRASP01111 189 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 IFNA1P01562 189 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 KIR2DL3P43628 341 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 RPP30P78346 268 aaKnown RBP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 MRM1Q6IN84 353 aaKnown RBP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 UBE3DQ7Z6J8 389 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 NOXO1Q8NFA2 376 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 OR56B2PQ8NGI1 322 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 SGK3Q96BR1 496 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 CDCA4Q9BXL8 241 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 PLA2G12AQ9BZM1 189 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 HAO2Q9NYQ3 351 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 FITM1A5D6W6 292 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 BHLHE40O14503 412 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 SULT1C4O75897 302 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 APEHP13798 732 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms