RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PMPCAQ10713 525 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 ZNF585AQ6P3V2 769 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 RCBTB1Q8NDN9 531 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 OR14C36Q8NHC7 312 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 C3orf49Q96BT1 292 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 PIK3IP1Q96FE7 263 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 TMEM68Q96MH6 324 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 PFDN5Q99471 154 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 PRRT1Q99946 306 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 SEMA6CQ9H3T2 930 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 HEBP2Q9Y5Z4 205 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 EIF1AYO14602 144 aaKnown RBP12.37□□□□□ -0.43
SYNE3-201ENST00000334258 GPR37O15354 613 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 ERCC1P07992 297 aaPredicted RBP12.37□□□□□ -0.43
SYNE3-201ENST00000334258 SPARCP09486 303 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 CSRP1P21291 193 aaKnown RBP12.37□□□□□ -0.43
SYNE3-201ENST00000334258 GPX4P36969 197 aaPredicted RBP12.37□□□□□ -0.43
SYNE3-201ENST00000334258 AKR1C3P42330 323 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 EIF1AXP47813 144 aaKnown RBP12.37□□□□□ -0.43
SYNE3-201ENST00000334258 LSSP48449 732 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 SLC25A1P53007 311 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 BPIFB3P59826 476 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 PDGFRLQ15198 375 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 OR52W1Q6IF63 320 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 TAS2R4Q9NYW5 299 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 C9orf170A2RU37 121 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 C11orf98E9PRG8 122 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 DNASE1L1P49184 302 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 MGAT2Q10469 447 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 TOMM20Q15388 145 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 CST6Q15828 149 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 GFOD2Q3B7J2 385 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 AGBL4Q5VU57 503 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 ZNF813Q6ZN06 617 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 SLC25A44Q96H78 314 aaPredicted RBP12.37□□□□□ -0.43
SYNE3-201ENST00000334258 SLC41A2Q96JW4 573 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 FGF22Q9HCT0 170 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 Q9N2J8 555 aa12.37□□□□□ -0.43
SYNE3-201ENST00000334258 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.36□□□□□ -0.43
SYNE3-201ENST00000334258 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.36□□□□□ -0.43
SYNE3-201ENST00000334258 C1orf196B1AJZ1 125 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 HRKO00198 91 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 STK17BO94768 372 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 SERPINF1P36955 418 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 MOGAT2Q3SYC2 334 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 CCDC3Q9BQI4 270 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 SLCO5A1Q9H2Y9 848 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 KIR3DX1Q9H7L2 352 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 DHCR7Q9UBM7 475 aaKnown RBP12.36□□□□□ -0.43
SYNE3-201ENST00000334258 EPHA6Q9UF33 1036 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 CARHSP1Q9Y2V2 147 aaKnown RBP12.36□□□□□ -0.43
SYNE3-201ENST00000334258 DENND4AQ7Z401 1863 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 TXNL1O43396 289 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 MELTFP08582 738 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 ABOP16442 354 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 ZBTB25P24278 435 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 ACTR1BP42025 376 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 ACTR1AP61163 376 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 TSC22D1Q15714 1073 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 FAM76BQ5HYJ3 339 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 TMEM225Q6GV28 225 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 TMEM200AQ86VY9 491 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 GVQW1Q8N7I0 195 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 OR4A4PQ8NGN8 299 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 PHOSPHO1Q8TCT1 267 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 FBXO17Q96EF6 278 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 C14orf79Q96F83 325 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 ZDHHC12Q96GR4 267 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 SEC11CQ9BY50 192 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 LYRM4Q9HD34 91 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 CLEC1BQ9P126 229 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 KLK13Q9UKR3 277 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 SERINC4A6NH21 518 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 H0Y8X5 98 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 XKRYO14609 159 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 RDH16O75452 317 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 ZNF735P0CB33 412 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 TSPAN7P41732 249 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 EGR3Q06889 387 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 RPL18Q07020 188 aaKnown RBP12.36□□□□□ -0.43
SYNE3-201ENST00000334258 PJVKQ0ZLH3 352 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 BIKQ13323 160 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 MEF2DQ14814 521 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 ISXQ2M1V0 245 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 COL13A1Q5TAT6 717 aaPredicted RBP12.36□□□□□ -0.43
SYNE3-201ENST00000334258 FCRL6Q6DN72 434 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 OR51A2Q8NGJ7 313 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 FAM46BQ96A09 425 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 CMBLQ96DG6 245 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 ZNF587Q96SQ5 575 aaPredicted RBP12.36□□□□□ -0.43
SYNE3-201ENST00000334258 ZFYVE21Q9BQ24 234 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 RHOFQ9HBH0 211 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 SLC17A5Q9NRA2 495 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 MMP26Q9NRE1 261 aa12.36□□□□□ -0.43
SYNE3-201ENST00000334258 CABIN1Q9Y6J0 2220 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 A0A1W2PQU0 124 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 CYR61O00622 381 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 PLGP00747 810 aaPredicted RBP12.35□□□□□ -0.43
SYNE3-201ENST00000334258 SMIM10L1P0DMW3 83 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 PPT1P50897 306 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms