RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 POLR2HP52434 150 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 DHRS2Q13268 280 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 ISXQ2M1V0 245 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 SEZ6L2Q6UXD5 910 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 STPG2Q8N412 459 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 LRRC75AQ8NAA5 344 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 RNF128Q8TEB7 428 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 ASB17Q8WXJ9 295 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 SEH1LQ96EE3 360 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 KIF25Q9UIL4 384 aa11.58□□□□□ -0.56
HMGCS1-201ENST00000325110 LOC101059948A0A1B0GTJ6 334 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 OR2M5A3KFT3 312 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 OR14I1A6ND48 311 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 HTR3BO95264 441 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 PMP2P02689 132 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 GNB3P16520 340 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 CRABP1P29762 137 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 EBPQ15125 230 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 SGCBQ16585 318 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 DNM1P34Q6PK57 102 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 FJX1Q86VR8 437 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 C9orf40Q8IXQ3 194 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 TXNIPQ9H3M7 391 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 SLC39A1Q9NY26 324 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 GSKIPQ9P0R6 139 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 CLDN16Q9Y5I7 305 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 SLC22A23A1A5C7 686 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 BIDP55957 195 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 ELAVL1Q15717 326 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 SLC51BQ86UW2 128 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 CLEC1AQ8NC01 280 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 PPP1R1CQ8WVI7 109 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 BANF2Q9H503 90 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 WBP1LQ9NX94 342 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 FRG2CA6NGY1 282 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 PMS2P2O95744 297 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 BGLAPP02818 100 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 CD1AP06126 327 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 SLC9A3R2Q15599 337 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 FAM69BQ5VUD6 431 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 ABHD12BQ7Z5M8 362 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 OR4D6Q8NGJ1 314 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 NPAS1Q99742 590 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 MFRPQ9BY79 579 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 PRR13Q9NZ81 148 aa11.57□□□□□ -0.56
HMGCS1-201ENST00000325110 TRBV5-7A0A0A0MS05 114 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 CPED1A4D0V7 1026 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 SLC6A9P48067 706 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 ATPAF1Q5TC12 328 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 BIVMQ86UB2 503 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 PXT1Q8NFP0 134 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 ST8SIA2Q92186 375 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 THRSPQ92748 146 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 WWTR1Q9GZV5 400 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 STK17BO94768 372 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 OR2A4O95047 310 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 HRH1P35367 487 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 ATP1B3P54709 279 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 CDH26Q8IXH8 852 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 EXD3Q8N9H8 876 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 MCHR2Q969V1 340 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 RNF166Q96A37 237 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 OR2A7Q96R45 310 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 S1PR5Q9H228 398 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 C8orf33Q9H7E9 229 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 VSX1Q9NZR4 365 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 GPN3Q9UHW5 284 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 MUC22E2RYF6 1773 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 KRBOX1C9JBD0 128 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 OR2T1O43869 369 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 ZP3P21754 424 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 MC2RQ01718 297 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 ZNF660Q6AZW8 331 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 SLC36A1Q7Z2H8 476 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 OR2AJ1Q8NGZ0 328 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 TMEM234Q8WY98 164 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 MAFIPQ8WZ33 124 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 PTGES2Q9H7Z7 377 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 FGF21Q9NSA1 209 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 KCNMB2Q9Y691 235 aa11.56□□□□□ -0.56
HMGCS1-201ENST00000325110 MAP1BP46821 2468 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 FADS1O60427 444 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 FOLR1P15328 257 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 AGTR1P30556 359 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 EMP2P54851 167 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 SLC26A5P58743 744 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 S100A10P60903 97 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 BAMBIQ13145 260 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 PPP1R1AQ13522 171 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 NR0B2Q15466 257 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 GRINAQ7Z429 371 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 OR52N4Q8NGI2 321 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 OR1L3Q8NH93 324 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 DCUN1D4Q92564 292 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 CPNE2Q96FN4 548 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 SLC6A15Q9H2J7 730 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 LMAN1LQ9HAT1 526 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 SLC2A4RGQ9NR83 387 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 A0A1W2PNR3 127 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms