RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 MFGE8Q08431 387 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-202ENST00000321728 HABP2Q14520 560 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-202ENST00000321728 TMEM200AQ86VY9 491 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 ZNF679Q8IYX0 411 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 PAQR4Q8N4S7 273 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-202ENST00000321728 BCORP1Q8N888 145 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 SPPL3Q8TCT6 385 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 TCEAL3Q969E4 200 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 CMBLQ96DG6 245 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 KTI12Q96EK9 354 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-202ENST00000321728 NUDT9Q9BW91 350 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 ACKR4Q9NPB9 350 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 PRMT8Q9NR22 394 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-202ENST00000321728 ZNF107Q9UII5 783 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-202ENST00000321728 LAMA1P25391 3075 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 HSPB2A8KAH6 182 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 H0Y8X5 98 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 OR6A2O95222 327 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 FAM157CP0CG43 387 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 ACTR1BP42025 376 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 DNASE1L1P49184 302 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 ARRB1P49407 418 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-202ENST00000321728 ACTR1AP61163 376 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 PDGFRLQ15198 375 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 TSC22D1Q15714 1073 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 HSPB2Q16082 182 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 EMC4Q5J8M3 183 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 ZNF585AQ6P3V2 769 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 ATG4DQ86TL0 474 aaPredicted RBP16.08■□□□□ 0.16
PRKCB-202ENST00000321728 CSNK1A1LQ8N752 337 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 ZDHHC22Q8N966 263 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 OR6S1Q8NH40 331 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 MICU1Q9BPX6 476 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 CERS4Q9HA82 394 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 NIT2Q9NQR4 276 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 GSN-AS1Q9NRJ2 163 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 CYTL1Q9NRR1 136 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 SLC2A8Q9NY64 477 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 B9D1Q9UPM9 204 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 MRPS33Q9Y291 106 aaKnown RBP16.08■□□□□ 0.16
PRKCB-202ENST00000321728 LTBP2Q14767 1821 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 FANCMQ8IYD8 2048 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 ARHGEF17Q96PE2 2063 aaPredicted RBP16.07■□□□□ 0.16
PRKCB-202ENST00000321728 TTLL8A6PVC2 850 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 COLCA2A8K830 154 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 C11orf98E9PRG8 122 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 GMFGO60234 142 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 HRH1P35367 487 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 LSSP48449 732 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 NAAAQ02083 359 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 EGR4Q05215 589 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 MST1LQ2TV78 715 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 FDX2Q6P4F2 183 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 TAF8Q7Z7C8 310 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 ZSCAN4Q8NAM6 433 aaPredicted RBP16.07■□□□□ 0.16
PRKCB-202ENST00000321728 OR9A4Q8NGU2 314 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 RNF128Q8TEB7 428 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 TOX2Q96NM4 488 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 LPAR3Q9UBY5 353 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 XKRYO14609 159 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 ICOSLGO75144 302 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 DUS4LO95620 317 aaKnown RBP16.07■□□□□ 0.16
PRKCB-202ENST00000321728 IFNA6P05013 189 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 SFTA3P0C7M3 94 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 SMIM6P0DI80 62 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 HPGDP15428 266 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 TMEM31Q5JXX7 168 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 SFTPA2Q8IWL1 248 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 PHOSPHO1Q8TCT1 267 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 NUDCD2Q8WVJ2 157 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 RELTQ969Z4 430 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 CCDC3Q9BQI4 270 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 RNF126Q9BV68 326 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 GDE1Q9NZC3 331 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 KIF26BQ2KJY2 2108 aa16.07■□□□□ 0.16
PRKCB-202ENST00000321728 EFSO43281 561 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 OIP5O43482 229 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 FOXS1O43638 330 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 APBB3O95704 486 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 CT45A8P0DMV1 189 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 CT45A9P0DMV2 189 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 RAB38P57729 211 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 CT45A2Q5DJT8 189 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 SLC18B1Q6NT16 456 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 POMZP3Q6PJE2 187 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 CBLN3Q6UW01 205 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 MDGA2Q7Z553 956 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 MISPQ8IVT2 679 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 OR13C3Q8NGS6 347 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 ROBO4Q8WZ75 1007 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 C14orf79Q96F83 325 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 ZNF251Q9BRH9 671 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 A0A0A6YYH2 397 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 METTL21EPA6NDL7 271 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 A6NJ64 397 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 C1orf196B1AJZ1 125 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 AGPAT2O15120 278 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 TO15178 435 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 PLGP00747 810 aaPredicted RBP16.06■□□□□ 0.16
PRKCB-202ENST00000321728 TIMP1P01033 207 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 226 ms