RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 STARD5Q9NSY2 213 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 ING3Q9NXR8 418 aa6.9□□□□□ -1.3
CNOT4-201ENST00000315544 RCC2Q9P258 522 aaKnown RBP6.9□□□□□ -1.3
CNOT4-201ENST00000315544 A0A0B4J2A0 478 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 DAPL1A0PJW8 107 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 RPL36A-HNRNPH2H7BZ11 118 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 PYCR1P32322 319 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 PSMB10P40306 273 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 CSNK1EP49674 416 aaKnown RBP6.9□□□□□ -1.31
CNOT4-201ENST00000315544 PNLIPRP2P54317 469 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 H3F3CQ6NXT2 135 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 MZT2AQ6P582 158 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 BTNL8Q6UX41 500 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 LRRC69Q6ZNQ3 347 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 SYNPRQ8TBG9 265 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 GRHL3Q8TE85 626 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 FBXW5Q969U6 566 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 ADAT3Q96EY9 351 aaPredicted RBP6.9□□□□□ -1.31
CNOT4-201ENST00000315544 HDHD2Q9H0R4 259 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 UCKL1Q9NWZ5 548 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 SHPKQ9UHJ6 478 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 GDF2Q9UK05 429 aaPredicted RBP6.9□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF780BQ9Y6R6 833 aa6.9□□□□□ -1.31
CNOT4-201ENST00000315544 HRNRQ86YZ3 2850 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-201ENST00000315544 IGKV1-27A0A075B6S5 117 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 IGKV1D-8A0A087WSZ0 117 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 TEX13DA0A0J9YY54 714 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-201ENST00000315544 IFITM10A6NMD0 228 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 OR5K4A6NMS3 321 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 CDC40O60508 579 aaKnown RBP eCLIP6.89□□□□□ -1.31
CNOT4-201ENST00000315544 VSIG8P0DPA2 414 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF3P17036 446 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 CD1CP29017 333 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 OPCMLQ14982 345 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 GPR68Q15743 365 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 C10orf128Q5T292 105 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 GAPTQ8N292 157 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 DTX3Q8N9I9 347 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 WDSUB1Q8N9V3 476 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 POC1AQ8NBT0 407 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 CAMKVQ8NCB2 501 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 BEST4Q8NFU0 473 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 OR4K13Q8NH42 304 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 UBASH3BQ8TF42 649 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 TCTN2Q96GX1 697 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 WWTR1Q9GZV5 400 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 SDHAF2Q9NX18 166 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 GPR132Q9UNW8 380 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF175Q9Y473 711 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 CHCHD2Q9Y6H1 151 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-201ENST00000315544 C2orf74A8MZ97 194 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 B3GALT2O43825 422 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 MPZL1O95297 269 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 ECDO95905 644 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF43P17038 809 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 BLVRAP53004 296 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 CLDN6P56747 220 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 STX4Q12846 297 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 POU4F3Q15319 338 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 GUCA2BQ16661 112 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 DRAM2Q6UX65 266 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 CFAP77Q6ZQR2 320 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 COLCA1Q6ZS62 124 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 TMUB2Q71RG4 321 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 IZUMO1Q8IYV9 350 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 SCARB1Q8WTV0 552 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 SGTBQ96EQ0 304 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 SLC5A7Q9GZV3 580 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF768Q9H5H4 540 aaKnown RBP6.89□□□□□ -1.31
CNOT4-201ENST00000315544 NOX3Q9HBY0 568 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 TMEM9BQ9NQ34 198 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 CUBNO60494 3623 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 PRAMEF2O60811 474 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 UTS2O95399 124 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 MT-ATP6P00846 226 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 PNMTP11086 282 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 HOXB1P14653 301 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-201ENST00000315544 ABCD3P28288 659 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 CD38P28907 300 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 VSX2P58304 361 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-201ENST00000315544 RAP2BP61225 183 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 MFAP5Q13361 173 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 TRIP6Q15654 476 aaKnown RBP6.89□□□□□ -1.31
CNOT4-201ENST00000315544 PLPPR5Q32ZL2 321 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 SPDYE7PQ495Y7 208 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 MZT2BQ6NZ67 158 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 Q6ZSR6 202 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 CSNK1A1LQ8N752 337 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 ZSCAN4Q8NAM6 433 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-201ENST00000315544 OR5AP2Q8NGF4 316 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 OR1N1Q8NGS0 311 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 ELP5Q8TE02 316 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 MVB12AQ96EY5 273 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 GPR174Q9BXC1 333 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 PRRG3Q9BZD7 231 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 FAM86C1Q9NVL1 165 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF581Q9P0T4 197 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 SRPK3Q9UPE1 567 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 AMDHD2Q9Y303 409 aa6.89□□□□□ -1.31
CNOT4-201ENST00000315544 HSPB11Q9Y547 144 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms