RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 NECAP2Q9NVZ3 263 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 GPR55Q9Y2T6 319 aaPredicted RBP7.49□□□□□ -1.21
VPS41-202ENST00000310301 ZNF727A8MUV8 499 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 MCRIP1C9JLW8 97 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 G3V3Q6 166 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 RPA2P15927 270 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 PPP2CBP62714 309 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 PPP2CAP67775 309 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 COX20Q5RI15 118 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 AGBL4Q5VU57 503 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 OR8G2PQ6IF36 304 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 LRRTM1Q86UE6 522 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 LGI3Q8N145 548 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 PTDSS2Q9BVG9 487 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 EVA1AQ9H8M9 152 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 FGF22Q9HCT0 170 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 HRASLSQ9HDD0 168 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 CBLCQ9ULV8 474 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 STRAPQ9Y3F4 350 aaKnown RBP7.49□□□□□ -1.21
VPS41-202ENST00000310301 A0A087WV62 115 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 IGHG1P01857 330 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 LPLP06858 475 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 TACR1P25103 407 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 CCR7P32248 378 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 PTTG1IPP53801 180 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 F2RL1P55085 397 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 SNRPEP62304 92 aaKnown RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 POU3F1Q03052 451 aaPredicted RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 SRSF5Q13243 272 aaKnown RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 IKZF1Q13422 519 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 CRMP1Q14194 572 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 CLEC12BQ2HXU8 276 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 DEFB109BQ30KR1 87 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 MOGAT2Q3SYC2 334 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 TCTE3Q8IZS6 198 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 SLC37A2Q8TED4 501 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 LRFN5Q96NI6 719 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 PRO1933Q9H354 126 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 SLC23A1Q9UHI7 598 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 OR52A1Q9UKL2 312 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 EMC9Q9Y3B6 208 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 MN1Q10571 1320 aaPredicted RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 CPEP16870 476 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 RAB5AP20339 215 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 GCH1P30793 250 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 FCGR2CP31995 323 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 UBE2G2P60604 165 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 KCNJ10P78508 379 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 NPSR1Q6W5P4 371 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 TIPARPQ7Z3E1 657 aaKnown RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 CLEC14AQ86T13 490 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 WFDC5Q8TCV5 224 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 TMEM255BQ8WV15 326 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 CCNL2Q96S94 520 aaPredicted RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 NEURL2Q9BR09 285 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 MOB1AQ9H8S9 216 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 ISYNA1Q9NPH2 558 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 GDF2Q9UK05 429 aaPredicted RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 SPAARA0A1B0GVQ0 90 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 OR5K3A6NET4 321 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 POM121BA6NF01 834 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 ZNF354AO60765 605 aaPredicted RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 HOXC4P09017 264 aaPredicted RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 MGMTP16455 207 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 TMEM11P17152 192 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 LTB4RQ15722 352 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 OVCH1Q7RTY7 1134 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 S100A7AQ86SG5 101 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 CARFQ8N187 725 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 KLHDC1Q8N7A1 406 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 OR5L1Q8NGL2 311 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 OR10D4PQ8NGN7 298 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 OR4F5Q8NH21 305 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 GPR119Q8TDV5 335 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 FGGYQ96C11 551 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 OR4F4Q96R69 305 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 NENFQ9UMX5 172 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 LOC285556D6RIA3 1793 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 PRRG2O14669 202 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 DDAH2O95865 285 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 CRYABP02511 175 aaKnown RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 ACSM4P0C7M7 580 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 SLC2A1P11166 492 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 CEACAM1P13688 526 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 HSF1Q00613 529 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 PYCR3Q53H96 274 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 FAAP20Q6NZ36 180 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 L3MBTL4Q8NA19 623 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 PDXPQ96GD0 296 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 UBL7Q96S82 380 aaPredicted RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 INSM2Q96T92 566 aaPredicted RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 SYT11Q9BT88 431 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 ABHD6Q9BV23 337 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 ARNT2Q9HBZ2 717 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 CHST2Q9Y4C5 530 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 GON4LQ3T8J9 2241 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 K7EQS6 105 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 SELENOFO60613 162 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 OR8U8P0C7N1 319 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 FGF7P21781 194 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms