RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ZDBF2Q9HCK1 2354 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 MYO7AQ13402 2215 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 A0A1B0GV72 72 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 AIPO00170 330 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TBX6O95947 436 aaPredicted RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 OPN1LWP04000 364 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 HRGP04196 525 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 CT62P0C5K7 136 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 SLC2A2P11168 524 aaPredicted RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 CPEP16870 476 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 RPS5P46782 204 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 MLF1P58340 268 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TPBGQ13641 420 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 RHEBQ15382 184 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ODF4Q2M2E3 257 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ZNF529Q6P280 563 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 PRSS41Q7RTY9 318 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 UBQLNLQ8IYU4 475 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TMEM105Q8N8V8 129 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 OR52I1Q8NGK6 324 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 OR5AK2Q8NH90 309 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TMEM203Q969S6 136 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 THOC3Q96J01 351 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 RNF32Q9H0A6 362 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ZNF430Q9H8G1 570 aaPredicted RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ZNF160Q9HCG1 818 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 PARD6AQ9NPB6 346 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 GAR1Q9NY12 217 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TREM2Q9NZC2 230 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 KLHL9Q9P2J3 617 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 DHDHQ9UQ10 334 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 STARD10Q9Y365 291 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 CHTOPQ9Y3Y2 248 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 DMRT1Q9Y5R6 373 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TRBV2A0A0J9YWF9 115 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 ZNF705FA8MVS1 300 aaPredicted RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 AQP7O14520 342 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 CTDSP2O14595 271 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 PPP1R2P9O14990 202 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 EIF3GO75821 320 aaKnown RBP eCLIP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 C1QBP02746 253 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 FBP1P09467 338 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 UCHL1P09936 223 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 UBCP0CG48 685 aaKnown RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 ZNF705DP0CH99 300 aaPredicted RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 ZNF705BP0CI00 300 aaPredicted RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 GRPRP30550 384 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 ALDH3B1P43353 468 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 MAP2K3P46734 347 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 EIF5AP63241 154 aaKnown RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 RPL19P84098 196 aaKnown RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 EXOSC6Q5RKV6 272 aaKnown RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 HES3Q5TGS1 186 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 EIF5AL1Q6IS14 154 aaKnown RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 ADAM5Q6NVV9 412 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 LPCAT3Q6P1A2 487 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 KIRREL2Q6UWL6 708 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 ESPNLQ6ZVH7 1005 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 SKA3Q8IX90 412 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 BOLLQ8N9W6 283 aaKnown RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 TMEM185AQ8NFB2 350 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 OR2T35Q8NGX2 323 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 NEIL3Q8TAT5 605 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 GPR119Q8TDV5 335 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 CT55Q8WUE5 264 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 TMEM121BQ9BXQ6 578 aaPredicted RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 RBM38Q9H0Z9 239 aaKnown RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 C1orf198Q9H425 327 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 EGLN3Q9H6Z9 239 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 ZNF226Q9NYT6 803 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 TAS2R8Q9NYW2 309 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 COMMD3Q9UBI1 195 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 PPP1R3CQ9UQK1 317 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 TRAV17A0A0B4J275 112 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 A0A1W2PQM1 296 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 PLSCR5A0PG75 271 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 PQLC2LA1A4F0 135 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 NPIPB9F8W1W9 429 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 ACTL6AO96019 429 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 CRYABP02511 175 aaKnown RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 TRAPPC2P0DI81 140 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 TRAPPC2BP0DI82 140 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 COX5BP10606 129 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 NDUFA6P56556 154 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 MALLQ13021 153 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 AQP6Q13520 282 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 TATDN3Q17R31 274 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 BCL2L15Q5TBC7 163 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 WDR73Q6P4I2 378 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 SLC35D2Q76EJ3 337 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 TMEM179BQ7Z7N9 219 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 MRGPREQ86SM8 312 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 GPAT4Q86UL3 456 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 CATSPERDQ86XM0 798 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 GLB1L2Q8IW92 636 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 GTPBP8Q8N3Z3 284 aaPredicted RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 MARVELD3Q96A59 401 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 MS4A7Q9GZW8 240 aaPredicted RBP5.42□□□□□ -1.54
SEC22A-201ENST00000309934 NDUFB11Q9NX14 153 aa5.42□□□□□ -1.54
SEC22A-201ENST00000309934 P4HTMQ9NXG6 502 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms