RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 HHLA2Q9UM44 414 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 CDK2AP1O14519 115 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 SP1P08047 785 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 CSRP1P21291 193 aaKnown RBP18.82■□□□□ 0.6
ATG4D-201ENST00000309469 GUCA1AP43080 201 aaPredicted RBP18.82■□□□□ 0.6
ATG4D-201ENST00000309469 SGCAQ16586 387 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 C20orf196Q8IYI0 205 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 ROBO4Q8WZ75 1007 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 ITPKCQ96DU7 683 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 ABHD1Q96SE0 405 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 TTTY12Q9BZ98 90 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 OR5H15A6NDH6 313 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 A6NL46 340 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 ZNF716A6NP11 495 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 ZNF878C9JN71 531 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 DOK2O60496 412 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 CD2P06729 351 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 CALCBP10092 127 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 CLDN12P56749 244 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 LSM6P62312 80 aaKnown RBP18.81■□□□□ 0.6
ATG4D-201ENST00000309469 TMEM244Q5VVB8 128 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 SLC25A25Q6KCM7 469 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 FOXL2NBQ6ZUU3 175 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 FCRLAQ7L513 359 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 MDS2Q8NDY4 140 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 ZNF775Q96BV0 537 aaPredicted RBP18.81■□□□□ 0.6
ATG4D-201ENST00000309469 AGAP4Q96P64 663 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 FLVCR1Q9Y5Y0 555 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 NCKAP5O14513 1909 aa18.81■□□□□ 0.6
ATG4D-201ENST00000309469 LOC107986453A0A1B0GWG9 222 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 DHHO43323 396 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 CELA3AP09093 270 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 UBCP0CG48 685 aaKnown RBP18.8■□□□□ 0.6
ATG4D-201ENST00000309469 LIPCP11150 499 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 RRADP55042 308 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 CARTPTQ16568 116 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 ABLIM2Q6H8Q1 611 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 ASPHD2Q6ICH7 369 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 VASH2Q86V25 355 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 CMTM4Q8IZR5 234 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 NIPAL2Q9H841 368 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 OR5V1Q9UGF6 321 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 FAM166BA8MTA8 275 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 RER1O15258 196 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 NME2P1O60361 137 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 UBL3O95164 117 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 MSR1P21757 451 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 NME2P22392 152 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 NR4A2P43354 598 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 INPP1P49441 399 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 SOX8P57073 446 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 TAF13Q15543 124 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 PDSS1Q5T2R2 415 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 ELMOD2Q8IZ81 293 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 OR13C3Q8NGS6 347 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 CPNE4Q96A23 557 aaPredicted RBP18.8■□□□□ 0.6
ATG4D-201ENST00000309469 THAP7Q9BT49 309 aaPredicted RBP18.8■□□□□ 0.6
ATG4D-201ENST00000309469 ZNF416Q9BWM5 594 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 RBM24Q9BX46 236 aaKnown RBP18.8■□□□□ 0.6
ATG4D-201ENST00000309469 ULBP2Q9BZM5 246 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 PBOV1Q9GZY1 135 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 HDHD2Q9H0R4 259 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 NELFAQ9H3P2 528 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 PNRC2Q9NPJ4 139 aaKnown RBP18.8■□□□□ 0.6
ATG4D-201ENST00000309469 FOXJ3Q9UPW0 622 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 CAMK2AQ9UQM7 478 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 RCE1Q9Y256 329 aa18.8■□□□□ 0.6
ATG4D-201ENST00000309469 KLF13Q9Y2Y9 288 aaPredicted RBP18.8■□□□□ 0.6
ATG4D-201ENST00000309469 P2RY10O00398 339 aa18.79■□□□□ 0.6
ATG4D-201ENST00000309469 HSD11B1P28845 292 aa18.79■□□□□ 0.6
ATG4D-201ENST00000309469 MAGEA5P43359 124 aa18.79■□□□□ 0.6
ATG4D-201ENST00000309469 PITPNAQ00169 270 aa18.79■□□□□ 0.6
ATG4D-201ENST00000309469 PLGLB1Q02325 96 aa18.79■□□□□ 0.6
ATG4D-201ENST00000309469 IGF2-ASQ6U949 168 aa18.79■□□□□ 0.6
ATG4D-201ENST00000309469 BAIAP2L2Q6UXY1 529 aa18.79■□□□□ 0.6
ATG4D-201ENST00000309469 GALNTL5Q7Z4T8 443 aa18.79■□□□□ 0.6
ATG4D-201ENST00000309469 TMEM251Q8N6I4 163 aa18.79■□□□□ 0.6
ATG4D-201ENST00000309469 CKLFQ9UBR5 152 aa18.79■□□□□ 0.6
ATG4D-201ENST00000309469 CACNA1CQ13936 2221 aa18.79■□□□□ 0.6
ATG4D-201ENST00000309469 TTRP02766 147 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 LHX2P50458 406 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 AKAP14Q86UN6 197 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 ENKURQ8TC29 256 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 CHAC2Q8WUX2 184 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 RFT1Q96AA3 541 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 NABP1Q96AH0 204 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 SLC25A38Q96DW6 304 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 ZNF845Q96IR2 970 aaPredicted RBP18.78■□□□□ 0.6
ATG4D-201ENST00000309469 FREM2Q5SZK8 3169 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 TTLL8A6PVC2 850 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 KLRC4-KLRK1H3BQV0 150 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 NKX2-8O15522 239 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 GLSO94925 669 aaPredicted RBP18.78■□□□□ 0.6
ATG4D-201ENST00000309469 ACSM4P0C7M7 580 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 PRKAR1AP10644 381 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 IGFBP3P17936 291 aaPredicted RBP18.78■□□□□ 0.6
ATG4D-201ENST00000309469 FSTP19883 344 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 CFPP27918 469 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 NTF4P34130 210 aa18.78■□□□□ 0.6
ATG4D-201ENST00000309469 MAP2K3P46734 347 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms