RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ZAR1Q86SH2 424 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 RANBP3LQ86VV4 465 aaPredicted RBP13.01□□□□□ -0.33
CDT1-201ENST00000301019 ZNF679Q8IYX0 411 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 KDF1Q8NAX2 398 aaPredicted RBP13.01□□□□□ -0.33
CDT1-201ENST00000301019 OR2T27Q8NH04 317 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 ASB17Q8WXJ9 295 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 SPACA5Q96QH8 159 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 UTP23Q9BRU9 249 aaKnown RBP13.01□□□□□ -0.33
CDT1-201ENST00000301019 PRSS16Q9NQE7 514 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 DNAJB6O75190 326 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 IFNA6P05013 189 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 NPSP0C0P6 89 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 PLAURQ03405 335 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 C22orf39Q6P5X5 142 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 DRAM2Q6UX65 266 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 ANKRD33Q7Z3H0 272 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 FAM220AQ7Z4H9 259 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 PNLDC1Q8NA58 520 aaKnown RBP13.01□□□□□ -0.33
CDT1-201ENST00000301019 HSD17B11Q8NBQ5 300 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 NPRL2Q8WTW4 380 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 CPNE4Q96A23 557 aaPredicted RBP13.01□□□□□ -0.33
CDT1-201ENST00000301019 KCNJ16Q9NPI9 418 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 TAS2R8Q9NYW2 309 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 PLXNB3Q9ULL4 1909 aa13.01□□□□□ -0.33
CDT1-201ENST00000301019 FANCMQ8IYD8 2048 aa13□□□□□ -0.33
CDT1-201ENST00000301019 A0A1B0GTI1 187 aa13□□□□□ -0.33
CDT1-201ENST00000301019 LILRB5O75023 590 aa13□□□□□ -0.33
CDT1-201ENST00000301019 ZNF205O95201 554 aa13□□□□□ -0.33
CDT1-201ENST00000301019 KNG1P01042 644 aa13□□□□□ -0.33
CDT1-201ENST00000301019 SLC2A5P22732 501 aa13□□□□□ -0.33
CDT1-201ENST00000301019 SLC11A1P49279 550 aa13□□□□□ -0.33
CDT1-201ENST00000301019 CSNK1EP49674 416 aaKnown RBP13□□□□□ -0.33
CDT1-201ENST00000301019 MECP2P51608 486 aaKnown RBP13□□□□□ -0.33
CDT1-201ENST00000301019 ELOCQ15369 112 aa13□□□□□ -0.33
CDT1-201ENST00000301019 GUK1Q16774 197 aa13□□□□□ -0.33
CDT1-201ENST00000301019 ANKRD16Q6P6B7 361 aa13□□□□□ -0.33
CDT1-201ENST00000301019 ZNF574Q6ZN55 896 aaPredicted RBP13□□□□□ -0.33
CDT1-201ENST00000301019 MDGA2Q7Z553 956 aa13□□□□□ -0.33
CDT1-201ENST00000301019 LYG2Q86SG7 212 aa13□□□□□ -0.33
CDT1-201ENST00000301019 NEU1Q99519 415 aa13□□□□□ -0.33
CDT1-201ENST00000301019 LSM5Q9Y4Y9 91 aaKnown RBP13□□□□□ -0.33
CDT1-201ENST00000301019 EOMESO95936 686 aa13□□□□□ -0.33
CDT1-201ENST00000301019 RPS23P62266 143 aaKnown RBP13□□□□□ -0.33
CDT1-201ENST00000301019 EXOSC7Q15024 291 aaKnown RBP13□□□□□ -0.33
CDT1-201ENST00000301019 IL34Q6ZMJ4 242 aa13□□□□□ -0.33
CDT1-201ENST00000301019 GKN2Q86XP6 184 aa13□□□□□ -0.33
CDT1-201ENST00000301019 SLC30A7Q8NEW0 376 aa13□□□□□ -0.33
CDT1-201ENST00000301019 MRPL37Q9BZE1 423 aaKnown RBP13□□□□□ -0.33
CDT1-201ENST00000301019 AICDAQ9GZX7 198 aa13□□□□□ -0.33
CDT1-201ENST00000301019 NELFAQ9H3P2 528 aa13□□□□□ -0.33
CDT1-201ENST00000301019 WDR76Q9H967 626 aa13□□□□□ -0.33
CDT1-201ENST00000301019 BCL2L10Q9HD36 194 aa13□□□□□ -0.33
CDT1-201ENST00000301019 HS3ST3B1Q9Y662 390 aa13□□□□□ -0.33
CDT1-201ENST00000301019 TCF20Q9UGU0 1960 aaKnown RBP13□□□□□ -0.33
CDT1-201ENST00000301019 A0A0A6YYH2 397 aa13□□□□□ -0.33
CDT1-201ENST00000301019 CCDC163A0A0D9SF12 145 aa13□□□□□ -0.33
CDT1-201ENST00000301019 A6NJ64 397 aa13□□□□□ -0.33
CDT1-201ENST00000301019 FCGR3AP08637 254 aa13□□□□□ -0.33
CDT1-201ENST00000301019 SLC35G4P0C7Q5 338 aa13□□□□□ -0.33
CDT1-201ENST00000301019 CRABP1P29762 137 aa13□□□□□ -0.33
CDT1-201ENST00000301019 LBX1P52954 281 aa13□□□□□ -0.33
CDT1-201ENST00000301019 ACY1Q03154 408 aa13□□□□□ -0.33
CDT1-201ENST00000301019 EID2Q8N6I1 236 aa13□□□□□ -0.33
CDT1-201ENST00000301019 ACOT4Q8N9L9 421 aa13□□□□□ -0.33
CDT1-201ENST00000301019 FBXO22Q8NEZ5 403 aa13□□□□□ -0.33
CDT1-201ENST00000301019 OR10C1Q96KK4 312 aa13□□□□□ -0.33
CDT1-201ENST00000301019 TOX2Q96NM4 488 aa13□□□□□ -0.33
CDT1-201ENST00000301019 AMELYQ99218 206 aa13□□□□□ -0.33
CDT1-201ENST00000301019 KCNE5Q9UJ90 142 aa13□□□□□ -0.33
CDT1-201ENST00000301019 HIST1H2BKO60814 126 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 HIST1H2BJP06899 126 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 CSNK2A2P19784 350 aaPredicted RBP12.99□□□□□ -0.33
CDT1-201ENST00000301019 HIST1H2BOP23527 126 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 S100A7P31151 101 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 HIST1H2BBP33778 126 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 DVL1P1P54792 670 aaPredicted RBP12.99□□□□□ -0.33
CDT1-201ENST00000301019 HIST1H2BDP58876 126 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 HIST1H2BCP62807 126 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 DHCR24Q15392 516 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 HIST2H2BEQ16778 126 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.99□□□□□ -0.33
CDT1-201ENST00000301019 TRAPPC6BQ86SZ2 158 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 OR2I1PQ8NGU4 316 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 HIST1H2BHQ93079 126 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 PACRGQ96M98 296 aaPredicted RBP12.99□□□□□ -0.33
CDT1-201ENST00000301019 CMTM3Q96MX0 182 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 HIST1H2BNQ99877 126 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 HIST1H2BMQ99879 126 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 SGPP1Q9BX95 441 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 C8orf33Q9H7E9 229 aaPredicted RBP12.99□□□□□ -0.33
CDT1-201ENST00000301019 INPP5EQ9NRR6 644 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 SDCBPO00560 298 aaPredicted RBP12.99□□□□□ -0.33
CDT1-201ENST00000301019 POP4O95707 220 aaKnown RBP12.99□□□□□ -0.33
CDT1-201ENST00000301019 SLC25A4P12235 298 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 BTN3A2P78410 334 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 RAB11BQ15907 218 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 KLHDC8AQ8IYD2 350 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 ZNF248Q8NDW4 579 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 OR10AD1Q8NGE0 317 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 NTNG2Q96CW9 530 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms