RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 OLFM2O95897 454 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 HMGA1P17096 107 aaKnown RBP12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FAM26DQ5JW98 314 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 LCN15Q6UWW0 184 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR1M1Q8NGA1 313 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 BCL7CQ8WUZ0 217 aaPredicted RBP12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PLPPR2Q96GM1 343 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TOX2Q96NM4 488 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SLC22A11Q9NSA0 550 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SLC22A13Q9Y226 551 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 hCG_1809904A0A1W2PP81 198 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 A0A1W2PPE2 198 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 A0A1W2PR64 198 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SHISA7A6NL88 538 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ZNF724A8MTY0 619 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ATP6V1G2-DDX39BF2Z307 99 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 DCTN6O00399 190 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FCMRO60667 390 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 GP2P55259 537 aaKnown RBP12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 IHHQ14623 411 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TMEM81Q6P7N7 255 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NANPQ8TBE9 248 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ASB16Q96NS5 453 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SARGQ9BW04 601 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 QPCTLQ9NXS2 382 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TMEM265A0A087WTH1 108 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TBXA2RP21731 343 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SLC35D3Q5M8T2 416 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 S100A7AQ86SG5 101 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RPS19BP1Q86WX3 136 aaKnown RBP12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SLC25A46Q96AG3 418 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 STACQ99469 402 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ZCCHC4Q9H5U6 513 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 HINT3Q9NQE9 182 aaKnown RBP12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 HMX2A2RU54 273 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SPI1P17947 270 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 IL3RAP26951 378 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ZNF266Q14584 549 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 AGERQ15109 404 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FAM58AQ8N1B3 248 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NKAIN3Q8N8D7 197 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RIMS4Q9H426 269 aaPredicted RBP12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SLC25A37Q9NYZ2 338 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 KCND3Q9UK17 655 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
CHRFAM7A-201ENST00000299847 IGLV3-10A0A075B6K4 115 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ABCD4O14678 606 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SPRY1O43609 319 aaPredicted RBP12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ACKR3P25106 362 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ZNF784Q8NCA9 323 aaPredicted RBP12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR52B4Q8NGK2 314 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR52N1Q8NH53 320 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FZR1Q9UM11 496 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SMIM18P0DKX4 95 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RRASP10301 218 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 GLRA1P23415 457 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RTL10Q7L3V2 364 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 DOK3Q7L591 496 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PTRH1Q86Y79 214 aaKnown RBP12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CA13Q8N1Q1 262 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PLEKHF2Q9H8W4 249 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 LYRM4Q9HD34 91 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FBXO8Q9NRD0 319 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 HS3ST3A1Q9Y663 406 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 WDR1O75083 606 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 APOBEC1P41238 236 aaKnown RBP12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 LGI3Q8N145 548 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NUDCD2Q8WVJ2 157 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NARFLQ9H6Q4 476 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 GPR84Q9NQS5 396 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 EXO1Q9UQ84 846 aaKnown RBP12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SYT5O00445 386 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 GPX5O75715 221 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 HLA-HP01893 362 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RPL18Q07020 188 aaKnown RBP12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PDCD1Q15116 288 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CXorf67Q86X51 503 aaPredicted RBP12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 MARC2Q969Z3 335 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 BOD1Q96IK1 185 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 MAGT1Q9H0U3 335 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NPAP1Q9NZP6 1156 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CORINQ9Y5Q5 1042 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TCRBV5S1A1TA0A578 114 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 IDSB3KWA1 339 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NKX2-1P43699 371 aaPredicted RBP12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 GFERP55789 205 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ISL2Q96A47 359 aa12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SBK2P0C263 348 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RBP2P50120 134 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SNRPGP62308 76 aaKnown RBP12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RPL7L1Q6DKI1 246 aaKnown RBP12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR4F5Q8NH21 305 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR4F4Q96R69 305 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 AUNIPQ9H7T9 357 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR5G3P0C626 314 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CCR9P51686 369 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 UBE2G1P62253 170 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 LAIR1Q6GTX8 287 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms