RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PRDX1Q06830 199 aaKnown RBP13.61□□□□□ -0.23
SCN3B-201ENST00000299333 THEM4Q5T1C6 240 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 PARS2Q7L3T8 475 aaKnown RBP13.61□□□□□ -0.23
SCN3B-201ENST00000299333 AAED1Q7RTV5 226 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 OR13C5Q8NGS8 318 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 PPP1R1CQ8WVI7 109 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 CLSTN3Q9BQT9 956 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 GLIPR2Q9H4G4 154 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 TMEM38AQ9H6F2 299 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 E5RGE8 158 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 HS3ST1O14792 307 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 CD3DP04234 171 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 CD14P08571 375 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 NEURL2Q9BR09 285 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 DYNLRB1Q9NP97 96 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 NSG2Q9Y328 171 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 CTNSO60931 367 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 TEKQ02763 1124 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 AQP6Q13520 282 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 COL19A1Q14993 1142 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 CLLU1Q5K131 121 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 SLC16A12Q6ZSM3 486 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 CDCA4Q9BXL8 241 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 DNMT3BQ9UBC3 853 aaKnown RBP13.61□□□□□ -0.23
SCN3B-201ENST00000299333 NTNG1Q9Y2I2 539 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 CRYM-AS1A6NIL9 109 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 ACAA1P09110 424 aaPredicted RBP13.6□□□□□ -0.23
SCN3B-201ENST00000299333 HNRNPA1P09651 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
SCN3B-201ENST00000299333 IAPPP10997 89 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 SLC14A2Q15849 920 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 SNRPGP15A8MWD9 76 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 HRO43593 1189 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 KIR2DL3P43628 341 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 FABP5Q01469 135 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 EDDM3AQ14507 147 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 FFAR4Q5NUL3 377 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 FAM162BQ5T6X4 162 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 LIPNQ5VXI9 398 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 NHLRC2Q8NBF2 726 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 SCMH1Q96GD3 660 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 Q96M85 177 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 IER2Q9BTL4 223 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 HSFX1Q9UBD0 423 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 ADAM11O75078 769 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 SLC2A10O95528 541 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 ABHD16AO95870 558 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 GPX2P18283 190 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 CYB5R2Q6BCY4 276 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF66Q6ZN08 573 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 NKAIN4Q8IVV8 208 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 OR1J1Q8NGS3 322 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 TMEM37Q8WXS4 190 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 YIPF6Q96EC8 236 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 PLEKHA2Q9HB19 425 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 SIRT3Q9NTG7 399 aaPredicted RBP13.6□□□□□ -0.23
SCN3B-201ENST00000299333 A0A1W2PNV4 684 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 HELTA6NFD8 242 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 DBX1A6NMT0 343 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 DCAF7P61962 342 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 TCEAL8Q8IYN2 117 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 APH1AQ96BI3 265 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 TINAGL1Q9GZM7 467 aaPredicted RBP13.6□□□□□ -0.23
SCN3B-201ENST00000299333 PPP1R3CQ9UQK1 317 aa13.6□□□□□ -0.23
SCN3B-201ENST00000299333 PRAMEF25A6NGN4 478 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 H0YGG7 62 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 LRP3O75074 770 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 HSBP1O75506 76 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 ABOP16442 354 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 TGM1P22735 817 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 RPL11P62913 178 aaKnown RBP13.59□□□□□ -0.23
SCN3B-201ENST00000299333 PRAMEF5Q5TYX0 476 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 PRAMEF6Q5VXH4 476 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 TM4SF18Q96CE8 201 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 COA3Q9Y2R0 106 aaPredicted RBP13.59□□□□□ -0.23
SCN3B-201ENST00000299333 TRAPPC1Q9Y5R8 145 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 NALCNQ8IZF0 1738 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 SPINT2O43291 252 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 SNCGO76070 127 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 C1SP09871 688 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 DCTDP32321 178 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 TMEM64Q6YI46 380 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF383Q8NA42 475 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 MZB1Q8WU39 189 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 SLCO4A1Q96BD0 722 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 ACER3Q9NUN7 267 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 SLCO1B1Q9Y6L6 691 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 ZFAND5O76080 213 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 IQCF3P0C7M6 154 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 F2RP25116 425 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 HSD17B7P56937 341 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 DLEU7Q6UYE1 221 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 ARL6IP6Q8N6S5 226 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 CBR3O75828 277 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 OR2J3O76001 311 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 UTS2O95399 124 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 PMP22Q01453 160 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 OR2B11Q5JQS5 317 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 PRAMEF20Q5VT98 475 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 ACSM5Q6NUN0 579 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 TMEM81Q6P7N7 255 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms