RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ANKRD13BQ86YJ7 626 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 OR4F15Q8NGB8 312 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 OR6K6Q8NGW6 343 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 HAVCR2Q8TDQ0 301 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 RNF128Q8TEB7 428 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 RAB2BQ8WUD1 216 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 TMEM45BQ96B21 275 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 PLPPR2Q96GM1 343 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 SRA1Q9HD15 236 aaKnown RBP18.41■□□□□ 0.54
SMCO4-201ENST00000298966 TMEM14AQ9Y6G1 99 aa18.41■□□□□ 0.54
SMCO4-201ENST00000298966 PRR14LQ5THK1 2151 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 IGLV1-36A0A0B4J1U3 117 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 OR6C65A6NJZ3 312 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 H0YC42 278 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 LIMS3P0CW19 117 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 LIMS4P0CW20 117 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 ETV1P50549 477 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 ZNF133P52736 654 aaPredicted RBP18.4■□□□□ 0.54
SMCO4-201ENST00000298966 WNT4P56705 351 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 CLDN17P56750 224 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 RASGEF1BQ0VAM2 473 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 SPHARQ15513 63 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 HIST3H3Q16695 136 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 SLC16A9Q7RTY1 509 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 WFDC8Q8IUA0 241 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 KLHL36Q8N4N3 616 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 FNDC9Q8TBE3 224 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 AKAP1Q92667 903 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMCO4-201ENST00000298966 ZMYND19Q96E35 227 aaPredicted RBP18.4■□□□□ 0.54
SMCO4-201ENST00000298966 TXNDC15Q96J42 360 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 FUNDC2Q9BWH2 189 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 YIPF3Q9GZM5 350 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 ERVK13-1Q9NX77 482 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 CLEC2DQ9UHP7 191 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 ENPP5Q9UJA9 477 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 CAB39Q9Y376 341 aaPredicted RBP18.4■□□□□ 0.54
SMCO4-201ENST00000298966 FLVCR1Q9Y5Y0 555 aa18.4■□□□□ 0.54
SMCO4-201ENST00000298966 DAPL1A0PJW8 107 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 ZNF724A8MTY0 619 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 C12orf71A8MTZ7 269 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 H7C1C5 153 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 SLC16A7O60669 478 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 RAMP1O60894 148 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 TGFBR2P37173 567 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 LCN6P62502 163 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 ACTA2P62736 377 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 ACTG2P63267 376 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 GALEQ14376 348 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 FAM214BQ7L5A3 538 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 NMD3Q96D46 503 aaKnown RBP18.39■□□□□ 0.53
SMCO4-201ENST00000298966 OR5M11Q96RB7 305 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 MGLLQ99685 303 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 TMEM204Q9BSN7 226 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 PRRG4Q9BZD6 226 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 GLRX2Q9NS18 164 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 PARPBPQ9NWS1 579 aa18.39■□□□□ 0.53
SMCO4-201ENST00000298966 IGHV3-15A0A0B4J1V0 119 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 A8MV72 311 aaPredicted RBP18.38■□□□□ 0.53
SMCO4-201ENST00000298966 GABARAPO95166 117 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 APOL3O95236 402 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 PYCR1P32322 319 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 CSNK1A1P48729 337 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 RUNX1T1Q06455 604 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 ACSM1Q08AH1 577 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 MLLT11Q13015 90 aaPredicted RBP18.38■□□□□ 0.53
SMCO4-201ENST00000298966 MED22Q15528 200 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 ARMCX4Q5H9R4 360 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 SHFQ7M4L6 423 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 P2RY8Q86VZ1 359 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 SLC35F2Q8IXU6 374 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 OR10H4Q8NGA5 316 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 TMEM54Q969K7 222 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 C12orf43Q96C57 262 aaKnown RBP18.38■□□□□ 0.53
SMCO4-201ENST00000298966 OR2M2Q96R28 347 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 INTS14Q96SY0 518 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 ZNF649Q9BS31 505 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 BCO1Q9HAY6 547 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 B3GAT2Q9NPZ5 323 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 KCNG2Q9UJ96 466 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 ALPK2Q86TB3 2170 aa18.38■□□□□ 0.53
SMCO4-201ENST00000298966 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.37■□□□□ 0.53
SMCO4-201ENST00000298966 CUBNO60494 3623 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 ZNF670-ZNF695F2Z2N8 137 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 SLC43A1O75387 559 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 ZNF432O94892 652 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 SCG5P05408 212 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 FAM157CP0CG43 387 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 CTLA4P16410 223 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 BDH1Q02338 343 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 GUSBP1Q15486 140 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 STK11Q15831 433 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 SLC16A12Q6ZSM3 486 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 KCTD20Q7Z5Y7 419 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 GLB1L2Q8IW92 636 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 TIGD4Q8IY51 512 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 TMEM123Q8N131 208 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 SYS1Q8N2H4 156 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 ZNF454Q8N9F8 522 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 ZIC4Q8N9L1 334 aa18.37■□□□□ 0.53
SMCO4-201ENST00000298966 ZNF485Q8NCK3 441 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms