RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 LILRB4Q8NHJ6 448 aa21.34■■□□□ 1.01
TRIM54-201ENST00000296098 GRPEL2Q8TAA5 225 aa21.34■■□□□ 1.01
TRIM54-201ENST00000296098 M1APQ8TC57 530 aa21.34■■□□□ 1.01
TRIM54-201ENST00000296098 MS4A3Q96HJ5 214 aa21.34■■□□□ 1.01
TRIM54-201ENST00000296098 OXGR1Q96P68 337 aa21.34■■□□□ 1.01
TRIM54-201ENST00000296098 C1orf198Q9H425 327 aa21.34■■□□□ 1.01
TRIM54-201ENST00000296098 HSPB11Q9Y547 144 aa21.34■■□□□ 1.01
TRIM54-201ENST00000296098 A0A087WZY1 265 aa21.33■■□□□ 1.01
TRIM54-201ENST00000296098 A0A1B0GUH1 482 aa21.33■■□□□ 1.01
TRIM54-201ENST00000296098 P2RY10O00398 339 aa21.33■■□□□ 1.01
TRIM54-201ENST00000296098 ZNF780AO75290 641 aaPredicted RBP21.33■■□□□ 1.01
TRIM54-201ENST00000296098 TGM6O95932 706 aa21.33■■□□□ 1.01
TRIM54-201ENST00000296098 CD37P11049 281 aa21.33■■□□□ 1.01
TRIM54-201ENST00000296098 FAUP35544 74 aaKnown RBP21.33■■□□□ 1.01
TRIM54-201ENST00000296098 ZNF239Q16600 458 aaKnown RBP21.33■■□□□ 1.01
TRIM54-201ENST00000296098 PCGF3Q3KNV8 242 aa21.33■■□□□ 1.01
TRIM54-201ENST00000296098 LINC00303Q3SY05 128 aa21.33■■□□□ 1.01
TRIM54-201ENST00000296098 GLYATL3Q5SZD4 288 aa21.33■■□□□ 1.01
TRIM54-201ENST00000296098 OR2Y1Q8NGV0 311 aa21.33■■□□□ 1.01
TRIM54-201ENST00000296098 ATG5Q9H1Y0 275 aa21.33■■□□□ 1.01
TRIM54-201ENST00000296098 RANBP3Q9H6Z4 567 aaPredicted RBP21.33■■□□□ 1.01
TRIM54-201ENST00000296098 CGGBP1Q9UFW8 167 aaPredicted RBP21.33■■□□□ 1.01
TRIM54-201ENST00000296098 TRAV18A0A075B6X5 111 aa21.33■■□□□ 1
TRIM54-201ENST00000296098 CSF1P09603 554 aa21.33■■□□□ 1
TRIM54-201ENST00000296098 CCDC92Q53HC0 331 aaPredicted RBP21.33■■□□□ 1
TRIM54-201ENST00000296098 METTL11BQ5VVY1 283 aa21.33■■□□□ 1
TRIM54-201ENST00000296098 SLC23A3Q6PIS1 610 aa21.33■■□□□ 1
TRIM54-201ENST00000296098 OR6X1Q8NH79 312 aa21.33■■□□□ 1
TRIM54-201ENST00000296098 NOX3Q9HBY0 568 aa21.33■■□□□ 1
TRIM54-201ENST00000296098 TAS2R8Q9NYW2 309 aa21.33■■□□□ 1
TRIM54-201ENST00000296098 POLR1DQ9Y2S0 133 aa21.33■■□□□ 1
TRIM54-201ENST00000296098 MEIKINA0A087WXM9 373 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 A0A1B0GVI7 797 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 AQP7P3A6NL99 342 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 AKR7A2O43488 359 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 LMX1BO60663 402 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 HPXP02790 462 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 SNRPD2P62316 118 aaKnown RBP21.32■■□□□ 1
TRIM54-201ENST00000296098 SPOCK1Q08629 439 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 ANGPT1Q15389 498 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 CARD17Q5XLA6 110 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 C9orf62Q8N4C0 152 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 NKAIN3Q8N8D7 197 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 OR10S1Q8NGN2 331 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 ZFP64Q9NPA5 681 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 PTTG3PQ9NZH4 202 aa21.32■■□□□ 1
TRIM54-201ENST00000296098 SULT2B1O00204 365 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 ACSM4P0C7M7 580 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 ZNF43P17038 809 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 SSR4P51571 173 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 SLC35A1P78382 337 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 ADGRE4PQ86SQ3 457 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 GTPBP8Q8N3Z3 284 aaPredicted RBP21.31■■□□□ 1
TRIM54-201ENST00000296098 SEC61A2Q9H9S3 476 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 SLC39A1Q9NY26 324 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 GDF2Q9UK05 429 aaPredicted RBP21.31■■□□□ 1
TRIM54-201ENST00000296098 DCDC2BA2VCK2 349 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 RAMP1O60894 148 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 NDUFB6O95139 128 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 CFAP77Q6ZQR2 320 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 JAGN1Q8N5M9 183 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 UTP23Q9BRU9 249 aaKnown RBP21.31■■□□□ 1
TRIM54-201ENST00000296098 ANGPTL4Q9BY76 406 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 MRPS18BQ9Y676 258 aaKnown RBP21.31■■□□□ 1
TRIM54-201ENST00000296098 LHFPL6Q9Y693 200 aa21.31■■□□□ 1
TRIM54-201ENST00000296098 TTRP02766 147 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 CCL3P10147 92 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 PRSS3P35030 304 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 FOLR3P41439 243 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 GUCA2AQ02747 115 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 SIGLEC14Q08ET2 396 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 SLC25A25Q6KCM7 469 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 SLC25A47Q6Q0C1 308 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 ELMOD2Q8IZ81 293 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 OR2AJ1Q8NGZ0 328 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 PBOV1Q9GZY1 135 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 EML6Q6ZMW3 1958 aa21.3■■□□□ 1
TRIM54-201ENST00000296098 LOC390937A0A1W2PQ73 354 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
TRIM54-201ENST00000296098 OR4C16Q8NGL9 310 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 ZNF431Q8TF32 576 aaPredicted RBP21.29■■□□□ 1
TRIM54-201ENST00000296098 CDCP1Q9H5V8 836 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 NSG1A0A0A6YYJ2 146 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 LOC102725191A0A1B0GVB3 256 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 ZNF878C9JN71 531 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 GABRA1P14867 456 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 KLK2P20151 261 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 RAD52P43351 418 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 ZP1P60852 638 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 C1orf100Q5SVJ3 147 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 GLDNQ6ZMI3 551 aaPredicted RBP21.29■■□□□ 1
TRIM54-201ENST00000296098 TMPPEQ6ZT21 453 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 CREB3L2Q70SY1 520 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 ZNF160Q9HCG1 818 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 MGAT4AQ9UM21 535 aa21.29■■□□□ 1
TRIM54-201ENST00000296098 ZNF726A6NNF4 738 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 ICMTO60725 284 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 PMS2P2O95744 297 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 LIFP15018 202 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 CDAP32320 146 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms