RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ABCG5Q9H222 651 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 NLKQ9UBE8 527 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 FBXL3Q9UKT7 428 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 NPIPA2E9PIF3 369 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 NPIPA3F8WFD2 350 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 EIF1AYO14602 144 aaKnown RBP8.12□□□□□ -1.11
PDPN-201ENST00000294489 CTDSPLO15194 276 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 RAMP1O60894 148 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 WDPCPO95876 746 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 QDPRP09417 244 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 UBCP0CG48 685 aaKnown RBP8.12□□□□□ -1.11
PDPN-201ENST00000294489 DCTDP32321 178 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 CASRP41180 1078 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 EIF1AXP47813 144 aaKnown RBP8.12□□□□□ -1.11
PDPN-201ENST00000294489 MMP16P51512 607 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 ART1P52961 327 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 TMEM244Q5VVB8 128 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 SPINK14Q6IE38 97 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 SLC25A47Q6Q0C1 308 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 ESPNLQ6ZVH7 1005 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 ASCL5Q7RTU5 278 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 CLEC1AQ8NC01 280 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 DNAAF1Q8NEP3 725 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 OR14L1PQ8NHC6 308 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 C15orf40Q8WUR7 153 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 ASB5Q8WWX0 329 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 PPP1R14AQ96A00 147 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 OR5V1Q9UGF6 321 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 STEAP1Q9UHE8 339 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 BOKQ9UMX3 212 aaPredicted RBP8.12□□□□□ -1.11
PDPN-201ENST00000294489 FOXJ3Q9UPW0 622 aa8.12□□□□□ -1.11
PDPN-201ENST00000294489 A0A0J9YW62 118 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 LANCL1O43813 399 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 NME2P1O60361 137 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 SRSF10O75494 262 aaKnown RBP8.11□□□□□ -1.11
PDPN-201ENST00000294489 ISG15P05161 165 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 ACHEP22303 614 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 NME2P22392 152 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 TGIF1Q15583 401 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 OR1C1Q15619 314 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 KCNMB1Q16558 191 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 BCL2L15Q5TBC7 163 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 SYNPRQ8TBG9 265 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 SCMH1Q96GD3 660 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 ZNF703Q9H7S9 590 aaPredicted RBP8.11□□□□□ -1.11
PDPN-201ENST00000294489 CDV3Q9UKY7 258 aaKnown RBP8.11□□□□□ -1.11
PDPN-201ENST00000294489 CACNG2Q9Y698 323 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 ZNF292O60281 2723 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 ORC5O43913 435 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 CD3GP09693 182 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 RRADP55042 308 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 GPR176Q14439 515 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 IGFL2Q6UWQ7 119 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 FOXL2NBQ6ZUU3 175 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 RHOUQ7L0Q8 258 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 LINGO2Q7L985 606 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 GALNT16Q8N428 558 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 OR13C3Q8NGS6 347 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 OR6N1Q8NGY5 312 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 TMEM54Q969K7 222 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 YIPF5Q969M3 257 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 SLC25A38Q96DW6 304 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 SF3B5Q9BWJ5 86 aaKnown RBP8.11□□□□□ -1.11
PDPN-201ENST00000294489 G6PC2Q9NQR9 355 aa8.11□□□□□ -1.11
PDPN-201ENST00000294489 GDF2Q9UK05 429 aaPredicted RBP8.11□□□□□ -1.11
PDPN-201ENST00000294489 LOC107986453A0A1B0GWG9 222 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 TTLL8A6PVC2 850 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 SULT1B1O43704 296 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 GSTZ1O43708 216 aaPredicted RBP8.1□□□□□ -1.11
PDPN-201ENST00000294489 TRAPPC2P0DI81 140 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 TRAPPC2BP0DI82 140 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 KLK2P20151 261 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 ITGA3P26006 1051 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 HSD11B1P28845 292 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 CSNK1A1P48729 337 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 RAC3P60763 192 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 DGCR2P98153 550 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 MFAP5Q13361 173 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 TAF13Q15543 124 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 TMEM69Q5SWH9 247 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 GLT8D1Q68CQ7 371 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 CREB3L2Q70SY1 520 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 LUZP2Q86TE4 346 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 SULF2Q8IWU5 870 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 SMIM4Q8WVI0 70 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 HAS2Q92819 552 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 HAVCR1Q96D42 359 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 NIPAL2Q9H841 368 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 EMC7Q9NPA0 242 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 GLTPQ9NZD2 209 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 MEGF11A6BM72 1044 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 HMX3A6NHT5 357 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 ZNF878C9JN71 531 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 TNFSF11O14788 317 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 FAM157BP0CG42 384 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 FSTP19883 344 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 CFPP27918 469 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 SLC6A1P30531 599 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 CDAP32320 146 aa8.1□□□□□ -1.11
PDPN-201ENST00000294489 NOVA1P51513 510 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms