RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 XRCC3O43542 346 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 CTAG2O75638 210 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 GLSO94925 669 aaPredicted RBP12.45□□□□□ -0.42
NXF1-201ENST00000294172 LIFP15018 202 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 ACHEP22303 614 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 DCTDP32321 178 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 MLF1P58340 268 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 MAB21L1Q13394 359 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 CFAP77Q6ZQR2 320 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 OR6X1Q8NH79 312 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 PAQR8Q8TEZ7 354 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 SCMH1Q96GD3 660 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 GHITMQ9H3K2 345 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 PISDQ9UG56 409 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 FLVCR2Q9UPI3 526 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 A0A087WZY1 265 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 LOC100289279A0A1B0GTE1 492 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 M0R296 226 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 QDPRP09417 244 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 FKBP2P26885 142 aaKnown RBP12.44□□□□□ -0.42
NXF1-201ENST00000294172 STOMP27105 288 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 GZMKP49863 264 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 DSCR4P56555 118 aaPredicted RBP12.44□□□□□ -0.42
NXF1-201ENST00000294172 CLDN17P56750 224 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 SCAND1P57086 179 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 MRPS10P82664 201 aaKnown RBP12.44□□□□□ -0.42
NXF1-201ENST00000294172 TMEM244Q5VVB8 128 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 ANKRD16Q6P6B7 361 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 BTN2A1Q7KYR7 527 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 JAGN1Q8N5M9 183 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 OR10S1Q8NGN2 331 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 OR2AJ1Q8NGZ0 328 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 C15orf40Q8WUR7 153 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 GIMAP1Q8WWP7 306 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 C20orf85Q9H1P6 137 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 ATG5Q9H1Y0 275 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 OR51J1Q9H342 316 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 DIABLOQ9NR28 239 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 FAM206AQ9NX38 181 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 MYEF2Q9P2K5 600 aaKnown RBP12.44□□□□□ -0.42
NXF1-201ENST00000294172 GDF2Q9UK05 429 aaPredicted RBP12.44□□□□□ -0.42
NXF1-201ENST00000294172 TCFL5Q9UL49 500 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 TRAV18A0A075B6X5 111 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 OR2M5A3KFT3 312 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 C7orf66A4D0T2 115 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 GGT3PA6NGU5 568 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 KDM4BO94953 1096 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 C1QBP02746 253 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 ISG15P05161 165 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 SP9P0CG40 484 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 UBCP0CG48 685 aaKnown RBP12.44□□□□□ -0.42
NXF1-201ENST00000294172 IGFBP3P17936 291 aaPredicted RBP12.44□□□□□ -0.42
NXF1-201ENST00000294172 MMP16P51512 607 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 GPR85P60893 370 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 B3GNTL1Q67FW5 361 aaPredicted RBP12.44□□□□□ -0.42
NXF1-201ENST00000294172 C6orf15Q6UXA7 325 aaPredicted RBP12.44□□□□□ -0.42
NXF1-201ENST00000294172 HDDC2Q7Z4H3 204 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 PPP1R32Q7Z5V6 425 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 BIVMQ86UB2 503 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 OR56B4Q8NH76 319 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 ZFAND1Q8TCF1 268 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 FGGYQ96C11 551 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 OR10A4Q9H209 315 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 ASH2LQ9UBL3 628 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 ZNF222Q9UK12 451 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 LHFPL6Q9Y693 200 aa12.44□□□□□ -0.42
NXF1-201ENST00000294172 PHF3Q92576 2039 aaKnown RBP12.44□□□□□ -0.42
NXF1-201ENST00000294172 TMEM272A0A1B0GTI8 110 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 ANKRD20A5PA0PJZ0 165 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 LNP1A1A4G5 178 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 ZIC3O60481 467 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 FCER2P06734 321 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 ACSM4P0C7M7 580 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 HTR2CP28335 458 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 HSD11B1P28845 292 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 GNALP38405 381 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 TAF13Q15543 124 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 GSG1Q2KHT4 349 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 RAB11FIP2Q7L804 512 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 TIPARPQ7Z3E1 657 aaKnown RBP12.43□□□□□ -0.42
NXF1-201ENST00000294172 LIX1LQ8IVB5 337 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 ZBTB44Q8NCP5 570 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 PBOV1Q9GZY1 135 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 MRPS18BQ9Y676 258 aaKnown RBP12.43□□□□□ -0.42
NXF1-201ENST00000294172 ANKRD34BA5PLL1 514 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 TTRP02766 147 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 FSTP19883 344 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 MNDAP41218 407 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 PRKXP51817 358 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 TMEM81Q6P7N7 255 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 SLC25A47Q6Q0C1 308 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 CT55Q8WUE5 264 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 OR2M2Q96R28 347 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 NIPAL2Q9H841 368 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 SH2D2AQ9NP31 389 aa12.43□□□□□ -0.42
NXF1-201ENST00000294172 ARPC4-TTLL3A0A0A6YYG9 625 aa12.42□□□□□ -0.42
NXF1-201ENST00000294172 MEIS3P1A6NDR6 274 aa12.42□□□□□ -0.42
NXF1-201ENST00000294172 RER1O15258 196 aa12.42□□□□□ -0.42
NXF1-201ENST00000294172 SYT7O43581 403 aa12.42□□□□□ -0.42
NXF1-201ENST00000294172 TLX3O43711 291 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms