RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 EFSO43281 561 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 AQP8O94778 261 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 GRPP07492 148 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 FPR3P25089 353 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 RGRP47804 291 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 KIAA1024LP59773 190 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 FOXK2Q01167 660 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 OTUD1Q5VV17 481 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 TEX261Q6UWH6 196 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 SPRED1Q7Z699 444 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 OR51F2Q8NH61 342 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 RASD2Q96D21 266 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 TOLLIPQ9H0E2 274 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 PLEKHA2Q9HB19 425 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 U3KQ87 197 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 HS3ST1O14792 307 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 TOX3O15405 576 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 HTR6P50406 440 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 B3GNTL1Q67FW5 361 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 GPRIN1Q7Z2K8 1008 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF561Q8N587 486 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 PLPP7Q8NBV4 271 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 PIGTQ969N2 578 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 DDOQ99489 341 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 PECRQ9BY49 303 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 CICQ96RK0 1608 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 GPR31O00270 319 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 PSMB2P49721 201 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 EXT1Q16394 746 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 PRR27Q6MZM9 219 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 LHFPL2Q6ZUX7 228 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 AMIGO3Q86WK7 504 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 C19orf47Q8N9M1 422 aaKnown RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 SLC38A5Q8WUX1 472 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 NME1P15531 152 aaKnown RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 CD38P28907 300 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 WDR73Q6P4I2 378 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 H1FNTQ75WM6 255 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 CPEB2Q7Z5Q1 589 aaKnown RBP8.02□□□□□ -1.13
NIPBL-201ENST00000282516 COMMD1Q8N668 190 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 OR10P1Q8NGE3 313 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 OR1J1Q8NGS3 322 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 SLC25A46Q96AG3 418 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 OR8B4Q96RC9 309 aa8.02□□□□□ -1.13
NIPBL-201ENST00000282516 LIMS3P0CW19 117 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 LIMS4P0CW20 117 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 RPA2P15927 270 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 CRISP2P16562 243 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 LINC00346Q8IVM7 164 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 TCEAL8Q8IYN2 117 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 NMNAT3Q96T66 252 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 JAM3Q9BX67 310 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 PARP12Q9H0J9 701 aaKnown RBP8.01□□□□□ -1.13
NIPBL-201ENST00000282516 CSO75390 466 aaKnown RBP8.01□□□□□ -1.13
NIPBL-201ENST00000282516 CD14P08571 375 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 BMP5P22003 454 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 CYB561P49447 251 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 C1orf140Q5VVS0 124 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF573Q86YE8 665 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 OCEL1Q9H607 264 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 ATP13A2Q9NQ11 1180 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 KIAA1217Q5T5P2 1943 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 A6NDN8 102 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 RRP8O43159 456 aaKnown RBP8.01□□□□□ -1.13
NIPBL-201ENST00000282516 RELL2Q8NC24 303 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-201ENST00000282516 FBXO27Q8NI29 283 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 LRFN3Q9BTN0 628 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 FAAP24Q9BTP7 215 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 NDUFB11Q9NX14 153 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 CD1EP15812 388 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 YOD1Q5VVQ6 348 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-201ENST00000282516 MAMDC4Q6UXC1 1216 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 TUSC5Q8IXB3 177 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 UBTD2Q8WUN7 234 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 KCND3Q9UK17 655 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 ZNFX1Q9P2E3 1918 aaKnown RBP8.01□□□□□ -1.13
NIPBL-201ENST00000282516 CCR7P32248 378 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 ADPRHP54922 357 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 TBPL2Q6SJ96 375 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 MED25Q71SY5 747 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 NXPE3Q969Y0 559 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 MOB3AQ96BX8 217 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 TPSD1Q9BZJ3 242 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 CHD5Q8TDI0 1954 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 TUBAL3A6NHL2 446 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF716A6NP11 495 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 GPR37O15354 613 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 HCRTR1O43613 425 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 HSBP1O75506 76 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 CDKN3Q16667 212 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 SPANXN5Q5MJ07 72 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 GOT1L1Q8NHS2 421 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-201ENST00000282516 TMEM230Q96A57 120 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF629Q9UEG4 869 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-201ENST00000282516 USP22Q9UPT9 525 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 FCGR2CP31995 323 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 GNG4P50150 75 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 CLDN2P57739 230 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 HERVK_113P61574 105 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 RPS16P62249 146 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms