RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 LIPGQ9Y5X9 500 aa19.49■□□□□ 0.71
CCDC7-201ENST00000277657 ZNF84P51523 738 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 CNIH2Q6PI25 160 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 XKRXQ6PP77 449 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 METAP1DQ6UB28 335 aaPredicted RBP19.48■□□□□ 0.71
CCDC7-201ENST00000277657 FAM131AQ6UXB0 335 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 STAC2Q6ZMT1 411 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 CENPSQ8N2Z9 138 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 RBM24Q9BX46 236 aaKnown RBP19.48■□□□□ 0.71
CCDC7-201ENST00000277657 ADAM30Q9UKF2 790 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 RER1O15258 196 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 MRPS34P82930 218 aaKnown RBP19.48■□□□□ 0.71
CCDC7-201ENST00000277657 ENDOGQ14249 297 aaKnown RBP19.48■□□□□ 0.71
CCDC7-201ENST00000277657 OXA1LQ15070 435 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 LRRTM1Q86UE6 522 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 ZNF837Q96EG3 531 aaPredicted RBP19.48■□□□□ 0.71
CCDC7-201ENST00000277657 SLITRK2Q9H156 845 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 NIPAL2Q9H841 368 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 TCF7L1Q9HCS4 588 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 ABRACLQ9P1F3 81 aa19.48■□□□□ 0.71
CCDC7-201ENST00000277657 CFAP47Q6ZTR5 3102 aa19.47■□□□□ 0.71
CCDC7-201ENST00000277657 NCOA6Q14686 2063 aaPredicted RBP19.47■□□□□ 0.71
CCDC7-201ENST00000277657 TMEM127O75204 238 aa19.47■□□□□ 0.71
CCDC7-201ENST00000277657 RIPPLY2Q5TAB7 128 aa19.47■□□□□ 0.71
CCDC7-201ENST00000277657 KLHL24Q6TFL4 600 aa19.47■□□□□ 0.71
CCDC7-201ENST00000277657 ZNF704Q6ZNC4 412 aaPredicted RBP19.47■□□□□ 0.71
CCDC7-201ENST00000277657 TSEN15Q8WW01 171 aaKnown RBP19.47■□□□□ 0.71
CCDC7-201ENST00000277657 DEFB127Q9H1M4 99 aa19.47■□□□□ 0.71
CCDC7-201ENST00000277657 KLK13Q9UKR3 277 aa19.47■□□□□ 0.71
CCDC7-201ENST00000277657 DNAJC13O75165 2243 aa19.47■□□□□ 0.71
CCDC7-201ENST00000277657 SYNGR4O95473 234 aa19.46■□□□□ 0.71
CCDC7-201ENST00000277657 ELK1P19419 428 aa19.46■□□□□ 0.71
CCDC7-201ENST00000277657 PTBP1P26599 531 aaKnown RBP eCLIP19.46■□□□□ 0.71
CCDC7-201ENST00000277657 HIST1H3AP68431 136 aa19.46■□□□□ 0.71
CCDC7-201ENST00000277657 BCL2L15Q5TBC7 163 aa19.46■□□□□ 0.71
CCDC7-201ENST00000277657 HIST2H3PS2Q5TEC6 136 aa19.46■□□□□ 0.71
CCDC7-201ENST00000277657 HIST2H3AQ71DI3 136 aa19.46■□□□□ 0.71
CCDC7-201ENST00000277657 LRRC28Q86X40 367 aaPredicted RBP19.46■□□□□ 0.71
CCDC7-201ENST00000277657 TRMT10AQ8TBZ6 339 aaKnown RBP19.46■□□□□ 0.71
CCDC7-201ENST00000277657 CPT1CQ8TCG5 803 aa19.46■□□□□ 0.71
CCDC7-201ENST00000277657 ASB5Q8WWX0 329 aa19.46■□□□□ 0.71
CCDC7-201ENST00000277657 PPP1R3EQ9H7J1 279 aa19.46■□□□□ 0.71
CCDC7-201ENST00000277657 MCTS1Q9ULC4 181 aaKnown RBP19.46■□□□□ 0.71
CCDC7-201ENST00000277657 TRAV8-7A0A075B6U6 113 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 TRGV5A0A0B4J1U4 118 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 TRAV17A0A0B4J275 112 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 IFITM5A6NNB3 132 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 AIPO00170 330 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 PAHP00439 452 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 ADRA2CP18825 462 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 ACHEP22303 614 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 PSMA6P60900 246 aaKnown RBP19.45■□□□□ 0.7
CCDC7-201ENST00000277657 FAM27BQ5VT28 67 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 GDPD1Q8N9F7 314 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 CRLF2Q9HC73 371 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 CYSLTR2Q9NS75 346 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 DDX28Q9NUL7 540 aaKnown RBP19.45■□□□□ 0.7
CCDC7-201ENST00000277657 HHLA2Q9UM44 414 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 V9GY05 133 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 DCDC2BA2VCK2 349 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 H3BSH0 61 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 UBCP0CG48 685 aaKnown RBP19.45■□□□□ 0.7
CCDC7-201ENST00000277657 CPN1P15169 458 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 RIN1Q13671 783 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 RSPO4Q2I0M5 234 aaPredicted RBP19.45■□□□□ 0.7
CCDC7-201ENST00000277657 TMEM244Q5VVB8 128 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 ELMOD2Q8IZ81 293 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 GPR137CQ8N3F9 429 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 SAMD12Q8N8I0 201 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 MINDY2Q8NBR6 621 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 GJC3Q8NFK1 279 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 LDAHQ9H6V9 325 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 RNF122Q9H9V4 155 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 DHDHQ9UQ10 334 aa19.45■□□□□ 0.7
CCDC7-201ENST00000277657 NPR2P20594 1047 aa19.44■□□□□ 0.7
CCDC7-201ENST00000277657 CTSSP25774 331 aa19.44■□□□□ 0.7
CCDC7-201ENST00000277657 LINGO2Q7L985 606 aa19.44■□□□□ 0.7
CCDC7-201ENST00000277657 ZNF433Q8N7K0 673 aaPredicted RBP19.44■□□□□ 0.7
CCDC7-201ENST00000277657 FNDC9Q8TBE3 224 aa19.44■□□□□ 0.7
CCDC7-201ENST00000277657 PBOV1Q9GZY1 135 aa19.44■□□□□ 0.7
CCDC7-201ENST00000277657 MOB1AQ9H8S9 216 aa19.44■□□□□ 0.7
CCDC7-201ENST00000277657 C14orf119Q9NWQ9 140 aa19.44■□□□□ 0.7
CCDC7-201ENST00000277657 SPRR3Q9UBC9 169 aa19.44■□□□□ 0.7
CCDC7-201ENST00000277657 NUFIP1Q9UHK0 495 aaKnown RBP19.44■□□□□ 0.7
CCDC7-201ENST00000277657 LOC107986453A0A1B0GWG9 222 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 TTRP02766 147 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 EIF4EP06730 217 aaKnown RBP19.43■□□□□ 0.7
CCDC7-201ENST00000277657 AZGP1P25311 298 aaKnown RBP19.43■□□□□ 0.7
CCDC7-201ENST00000277657 HSD11B1P28845 292 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 GRB2P62993 217 aaKnown RBP19.43■□□□□ 0.7
CCDC7-201ENST00000277657 PMP22Q01453 160 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 TAF13Q15543 124 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 BAK1Q16611 211 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 TRIM16LQ309B1 348 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 ASPHD2Q6ICH7 369 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 WDYHV1Q96HA8 205 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 COX4I2Q96KJ9 171 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 BCO1Q9HAY6 547 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 TMEM38BQ9NVV0 291 aa19.43■□□□□ 0.7
CCDC7-201ENST00000277657 EMC3Q9P0I2 261 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms