RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 BCL6P41182 706 aa7.32□□□□□ -1.24
LIMD1-201ENST00000273317 SUMO1P63165 101 aaKnown RBP7.32□□□□□ -1.24
LIMD1-201ENST00000273317 ARHGAP11BQ3KRB8 267 aa7.32□□□□□ -1.24
LIMD1-201ENST00000273317 SIPA1L3O60292 1781 aaPredicted RBP7.32□□□□□ -1.24
LIMD1-201ENST00000273317 SSSCA1O60232 199 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 NKX2-1P43699 371 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-201ENST00000273317 CLDN12P56749 244 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 TBPL2Q6SJ96 375 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 FAM26EQ8N5C1 309 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 OR4F5Q8NH21 305 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 APH1AQ96BI3 265 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 TIMD4Q96H15 378 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 OR4F4Q96R69 305 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 NKX2-4Q9H2Z4 354 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 HRH3Q9Y5N1 445 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 KIAA1551Q9HCM1 1747 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 OR5H14A6NHG9 310 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ACOT8O14734 319 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 NOVP48745 357 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 PNLIPRP3Q17RR3 467 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 TMEM52BQ4KMG9 183 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 SMIM19Q96E16 107 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 FAM103A1Q9BTL3 118 aaKnown RBP7.31□□□□□ -1.24
LIMD1-201ENST00000273317 HS3ST3A1Q9Y663 406 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 TERTO14746 1132 aaKnown RBP7.31□□□□□ -1.24
LIMD1-201ENST00000273317 HSD17B6O14756 317 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 LY86O95711 162 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 NID1P14543 1247 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 LIPAP38571 399 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ZNF90Q03938 601 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 MPPED2Q15777 294 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 RNF212Q495C1 297 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ANGPTL6Q8NI99 470 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 OR5M11Q96RB7 305 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 DDOQ99489 341 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 SLC25A19Q9HC21 320 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 MED9Q9NWA0 146 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 SMIM18P0DKX4 95 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 HLA-FP30511 346 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ELAVL1Q15717 326 aaKnown RBP7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ANKRD16Q6P6B7 361 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 GDPD3Q7L5L3 318 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 SYS1Q8N2H4 156 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 IP6K3Q96PC2 410 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 A0A1B0GX78 115 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 OR5H15A6NDH6 313 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 OR5H1A6NKK0 313 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 SELENOFO60613 162 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 CTNSO60931 367 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 PSMB6P28072 239 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 DCXRQ7Z4W1 244 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 RASD2Q96D21 266 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 LYRM2Q9NU23 88 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-201ENST00000273317 OBP2AQ9NY56 170 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 TRPM3Q9HCF6 1732 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-201ENST00000273317 BCL2L11O43521 198 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 FUCA1P04066 466 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 LIMS3P0CW19 117 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 LIMS4P0CW20 117 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ZP3P21754 424 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ELLP55199 621 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-201ENST00000273317 CLDN20P56880 219 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 GTF2H5Q6ZYL4 71 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 LMNTD1Q8N9Z9 388 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 RHBDD1Q8TEB9 315 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ST8SIA4Q92187 359 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ZNF355PQ9NSJ1 428 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 DNAJC25-GNG10A0A024R161 153 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 TFAP2AP05549 437 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 FBP1P09467 338 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 LIM2P55344 173 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 PET117Q6UWS5 81 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ST8SIA1Q92185 356 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 DVL3Q92997 716 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-201ENST00000273317 EGLN2Q96KS0 407 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 DCBLD2Q96PD2 775 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 TAAR6Q96RI8 345 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 BCO1Q9HAY6 547 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 PISDQ9UG56 409 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 POLDIP2Q9Y2S7 368 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 KIAA2026Q5HYC2 2103 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 NOTCH3Q9UM47 2321 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 MYADML2A6NDP7 307 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ABCD4O14678 606 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 TOR2AQ5JU69 321 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 GOT1L1Q8NHS2 421 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ZNF845Q96IR2 970 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-201ENST00000273317 ATP13A2Q9NQ11 1180 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 CYB5R1Q9UHQ9 305 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 NHSQ6T4R5 1651 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 CYTIPO60759 359 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 OR13C7P0DN81 318 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 OR8G1Q15617 311 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 OR8G2PQ6IF36 304 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 Q6ZPB1 254 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-201ENST00000273317 C20orf24Q9BUV8 137 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 SLC17A5Q9NRA2 495 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 OSGIN2Q9Y236 505 aa7.31□□□□□ -1.24
LIMD1-201ENST00000273317 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.3□□□□□ -1.24
LIMD1-201ENST00000273317 G3V3Q6 166 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms