RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 FOXD3Q9UJU5 478 aaPredicted RBP14.73□□□□□ -0.05
CCDC40-201ENST00000269318 FOXJ3Q9UPW0 622 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 ETV7Q9Y603 341 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 CTDSPLO15194 276 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 UBCP0CG48 685 aaKnown RBP14.72□□□□□ -0.05
CCDC40-201ENST00000269318 SCAND1P57086 179 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 CARD18P57730 90 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 BCL2L15Q5TBC7 163 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 AGAP6Q5VW22 663 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 HACD4Q5VWC8 232 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 MZT2BQ6NZ67 158 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 IL22RA1Q8N6P7 574 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 OR2AJ1Q8NGZ0 328 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 ENKURQ8TC29 256 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 HPS1Q92902 700 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 YIPF5Q969M3 257 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 AGAP4Q96P64 663 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 ABI3Q9P2A4 366 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 POLR1DQ9Y2S0 133 aa14.72□□□□□ -0.05
CCDC40-201ENST00000269318 SPAARA0A1B0GVQ0 90 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 PRR33A8MZF0 331 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 ZNF878C9JN71 531 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 DLL1O00548 723 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 DOK2O60496 412 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 WDPCPO95876 746 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 CD2P06729 351 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 INPP1P49441 399 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 STARP49675 285 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 SELENOPP49908 381 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 GABREP78334 506 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 TCF15Q12870 199 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 OR1C1Q15619 314 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 SLC36A2Q495M3 483 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 TMEM244Q5VVB8 128 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 ZNF57Q68EA5 555 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-201ENST00000269318 ELMOD2Q8IZ81 293 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 OR6N1Q8NGY5 312 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 OR2V1Q8NHB1 315 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 ITPKCQ96DU7 683 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 HES7Q9BYE0 225 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 ZNF703Q9H7S9 590 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-201ENST00000269318 RABL2AQ9UBK7 228 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-201ENST00000269318 STEAP1Q9UHE8 339 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 RABL2BQ9UNT1 228 aa14.71□□□□□ -0.05
CCDC40-201ENST00000269318 TFECO14948 347 aaPredicted RBP14.71□□□□□ -0.06
CCDC40-201ENST00000269318 RER1O15258 196 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 GSTZ1O43708 216 aaPredicted RBP14.71□□□□□ -0.06
CCDC40-201ENST00000269318 TTRP02766 147 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 ACSM4P0C7M7 580 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 CD37P11049 281 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 LSM6P62312 80 aaKnown RBP14.71□□□□□ -0.06
CCDC40-201ENST00000269318 DGCR2P98153 550 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 FAM166AQ6J272 317 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 KLHL24Q6TFL4 600 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 C20orf196Q8IYI0 205 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 IZUMO1Q8IYV9 350 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 SYNPRQ8TBG9 265 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 NABP1Q96AH0 204 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 FER1L6-AS2Q96M78 137 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 ZFP3Q96NJ6 502 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 PBOV1Q9GZY1 135 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 DDX28Q9NUL7 540 aaKnown RBP14.71□□□□□ -0.06
CCDC40-201ENST00000269318 TAS2R4Q9NYW5 299 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 NPAP1Q9NZP6 1156 aa14.71□□□□□ -0.06
CCDC40-201ENST00000269318 MRPS7Q9Y2R9 242 aaKnown RBP14.71□□□□□ -0.06
CCDC40-201ENST00000269318 ZNF716A6NP11 495 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 CDRT15L2A8MXV6 281 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 P2RY10O00398 339 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 CXCL13O43927 109 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 ITGA5P08648 1049 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 POU3F2P20265 443 aaPredicted RBP14.7□□□□□ -0.06
CCDC40-201ENST00000269318 CD82P27701 267 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 PSMA6P60900 246 aaKnown RBP14.7□□□□□ -0.06
CCDC40-201ENST00000269318 ABLIM2Q6H8Q1 611 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 GLCCI1Q86VQ1 547 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 SULF2Q8IWU5 870 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 OR13C3Q8NGS6 347 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 OR10D3Q8NH80 312 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 RAB40AQ8WXH6 277 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 INTS12Q96CB8 462 aaKnown RBP14.7□□□□□ -0.06
CCDC40-201ENST00000269318 HAVCR1Q96D42 359 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 ZNF416Q9BWM5 594 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 NIPAL2Q9H841 368 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 RNF121Q9H920 327 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 PLA2G3Q9NZ20 509 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 FLVCR1Q9Y5Y0 555 aa14.7□□□□□ -0.06
CCDC40-201ENST00000269318 MEIOCA2RUB1 952 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 HPNP05981 417 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 CD3GP09693 182 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 MSR1P21757 451 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 GPR176Q14439 515 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 LINC00696Q6ZRV3 163 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 PRSS45Q7RTY3 260 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 AKAP14Q86UN6 197 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 CLEC1AQ8NC01 280 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 SMIM4Q8WVI0 70 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 NELFAQ9H3P2 528 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 CKLFQ9UBR5 152 aa14.69□□□□□ -0.06
CCDC40-201ENST00000269318 NUFIP1Q9UHK0 495 aaKnown RBP14.69□□□□□ -0.06
CCDC40-201ENST00000269318 PHF3Q92576 2039 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms