RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 LAMA1P25391 3075 aa7.92□□□□□ -1.14
VAPB-201ENST00000265619 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 FAM171A2A8MVW0 826 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 RPP14O95059 124 aaKnown RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 IFNA17P01571 189 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 PDX1P52945 283 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 TAS2R43P59537 309 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 HNRNPKP61978 463 aaKnown RBP eCLIP7.91□□□□□ -1.14
VAPB-201ENST00000265619 FOXO1Q12778 655 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 EBPQ15125 230 aaKnown RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 C4orf17Q53FE4 359 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 LANCL3Q6ZV70 420 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 RD3Q7Z3Z2 195 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 RTN4RL2Q86UN3 420 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 NRROSQ86YC3 692 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 OR2L5Q8NG80 312 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 ZPLD1Q8TCW7 415 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 ASB17Q8WXJ9 295 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 OR8D1Q8WZ84 308 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 MRGPRX3Q96LB0 322 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 MCHR1Q99705 422 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 RGCCQ9H4X1 137 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 EPHX3Q9H6B9 360 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 BCO1Q9HAY6 547 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 IL17BQ9UHF5 180 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 CABIN1Q9Y6J0 2220 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 CHD3Q12873 2000 aaKnown RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 TGIF2-C20orf24A0A0A6YYL0 155 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 MKRN2OSH3BPM6 223 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 WNT11O96014 354 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 IFNA10P01566 189 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 HMGN2P05204 90 aaKnown RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 CRHP06850 196 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 CSF1P09603 554 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 RAB40ALP0C0E4 278 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 C8orf89P0DMQ9 161 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 OR13C7P0DN81 318 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 ZBTB25P24278 435 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 MPZP25189 248 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 FAUP35544 74 aaKnown RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 DRAM2Q6UX65 266 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 Q6ZRG5 221 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 TAF8Q7Z7C8 310 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 POC1BQ8TC44 478 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 Q8WTZ3 238 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 RAB40AQ8WXH6 277 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 FOXRED1Q96CU9 486 aaPredicted RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 PRSS27Q9BQR3 290 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 DDA1Q9BW61 102 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 TPSD1Q9BZJ3 242 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 ULBP3Q9BZM4 244 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 SIDT1Q9NXL6 827 aaKnown RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 CNTRLQ7Z7A1 2325 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 UNC119BA6NIH7 251 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 ZNF724A8MTY0 619 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 H7BY64 318 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 RPL36A-HNRNPH2H7BZ11 118 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 RAB3DO95716 219 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 TRGC2P03986 189 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 PCCBP05166 539 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 HNRNPA1P09651 372 aaKnown RBP eCLIP7.91□□□□□ -1.14
VAPB-201ENST00000265619 MDKP21741 143 aaPredicted RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 SERPINF1P36955 418 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 CEACAM6P40199 344 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 DVL1P1P54792 670 aaPredicted RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 TMEM115Q12893 351 aaPredicted RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 ZNF674Q2M3X9 581 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 OTPQ5XKR4 325 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 C1QL4Q86Z23 238 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 APCDD1LQ8NCL9 501 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 ZNF563Q8TA94 476 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 CD300LFQ8TDQ1 290 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 MOAP1Q96BY2 351 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 GALNT14Q96FL9 552 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 IL17FQ96PD4 163 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 ARHGDIGQ99819 225 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 NDUFAF3Q9BU61 184 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 C1QTNF2Q9BXJ5 285 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 OR14J1Q9UGF5 321 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 KCNE5Q9UJ90 142 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 PLAGL1Q9UM63 463 aa7.91□□□□□ -1.14
VAPB-201ENST00000265619 MRPS33Q9Y291 106 aaKnown RBP7.91□□□□□ -1.14
VAPB-201ENST00000265619 TSPAN11A1L157 253 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 C5orf51A6NDU8 294 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 SLC22A31A6NKX4 558 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 K7ESM1 405 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 NME2P1O60361 137 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 OR2C1O95371 312 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 MPC1LP0DKB6 136 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 ATP1B2P14415 290 aaPredicted RBP7.9□□□□□ -1.14
VAPB-201ENST00000265619 IFNGR2P38484 337 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 ERVFRD-1P60508 538 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 RAB4BP61018 213 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 BTG2P78543 158 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 MRPS11P82912 194 aaKnown RBP7.9□□□□□ -1.14
VAPB-201ENST00000265619 DECR1Q16698 335 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 TPRG1Q6ZUI0 275 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 PARS2Q7L3T8 475 aaKnown RBP7.9□□□□□ -1.14
VAPB-201ENST00000265619 ZNF321PQ8N8H1 164 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms