RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 OR1E1P30953 314 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SERPINB5P36952 375 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 CFHR2P36980 270 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TGFBR2P37173 567 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 HPCAL1P37235 193 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TALDO1P37837 337 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 HSPA9P38646 679 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 BDKRB1P46663 353 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 NOVP48745 357 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 HCAR3P49019 387 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 NKX2-5P52952 324 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 KCNJ2P63252 427 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 LCN2P80188 198 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 EWSR1Q01844 656 aaKnown RBP eCLIP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SIGLEC14Q08ET2 396 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 KLRB1Q12918 225 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TMED2Q15363 201 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ZNF77Q15935 545 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TIGITQ495A1 244 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 C9orf135Q5VTT2 229 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 RSBN1Q5VWQ0 802 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 KHDRBS2Q5VWX1 349 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 C22orf42Q6IC83 251 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 OR5M10Q6IEU7 315 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ZFP1Q6P2D0 407 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 CXCL17Q6UXB2 119 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 PEX26Q7Z412 305 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SETD3Q86TU7 594 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ERI1Q8IV48 349 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 IFT20Q8IY31 132 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SYS1Q8N2H4 156 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 INO80EQ8NBZ0 244 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ACBD4Q8NC06 268 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SDR9C7Q8NEX9 313 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 OR2L5Q8NG80 312 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 OR1L6Q8NGR2 347 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 OR2L8Q8NGY9 312 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 OR10J5Q8NHC4 309 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 MAGEE2Q8TD90 523 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 FAM172AQ8WUF8 416 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 PIH1D2Q8WWB5 315 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 BADQ92934 168 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 YIPF5Q969M3 257 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 PDXPQ96GD0 296 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 RNF145Q96MT1 663 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 RILPQ96NA2 401 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 PRRT1Q99946 306 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ZNF251Q9BRH9 671 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 NAT9Q9BTE0 207 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ZNF717Q9BY31 904 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 NXF3Q9H4D5 531 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 GIN1Q9NXP7 522 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 KIF25Q9UIL4 384 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 RIMS3Q9UJD0 308 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 PRPF19Q9UMS4 504 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 PDE10AQ9Y233 779 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 PRG3Q9Y2Y8 225 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 KPTNQ9Y664 436 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ZNF646O15015 1829 aaPredicted RBP3.18□□□□□ -1.9
CCDC54-201ENST00000261058 ERCC6Q03468 1493 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 RFX7Q2KHR2 1363 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 JCADQ9P266 1359 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 TRBV9A0A0B4J1U6 114 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 LRP5LA4QPB2 252 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 EPOPA6NHQ4 379 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 LINC00587B1AMM8 73 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 F5H6K3 240 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 PRAMEF26H0Y7S4 382 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 M0R3G1 203 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 TXNDC9O14530 226 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 RFXANKO14593 260 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 DPM1O60762 260 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 RAMP3O60896 148 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 LYPLA2O95372 231 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 GAPDHP04406 335 aaKnown RBP3.18□□□□□ -1.9
CCDC54-201ENST00000261058 LINC00614P0C842 121 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 MAS1LP35410 378 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 SLCO1A2P46721 670 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 GNPDA1P46926 289 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 ATP5J2P56134 94 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 OR2B6P58173 313 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 PSME3P61289 254 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 ATP6V0D1P61421 351 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 ERVK-25P63136 954 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 MRPS11P82912 194 aaKnown RBP3.18□□□□□ -1.9
CCDC54-201ENST00000261058 OC90Q02509 493 aaPredicted RBP3.18□□□□□ -1.9
CCDC54-201ENST00000261058 KLRC3Q07444 240 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 RGS1Q08116 209 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 MED21Q13503 144 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 TOMM34Q15785 309 aaPredicted RBP3.18□□□□□ -1.9
CCDC54-201ENST00000261058 MRPL23Q16540 153 aaKnown RBP3.18□□□□□ -1.9
CCDC54-201ENST00000261058 ISXQ2M1V0 245 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 C5orf64Q2M2E5 130 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 AKIRIN2Q53H80 203 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 C1orf220Q5T0J3 134 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 ZNF691Q5VV52 312 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 HACD4Q5VWC8 232 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 KCTD16Q68DU8 428 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 OR8G2PQ6IF36 304 aa3.18□□□□□ -1.9
CCDC54-201ENST00000261058 CLEC18BQ6UXF7 455 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms