RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SDHCQ99643 169 aaPredicted RBP19.75■□□□□ 0.75
SIX3-201ENST00000260653 G6PC2Q9NQR9 355 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 TMEM269A0A1B0GVZ9 245 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 KLK10O43240 276 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 SLC43A1O75387 559 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 MAPK3P27361 379 aaPredicted RBP19.75■□□□□ 0.75
SIX3-201ENST00000260653 PPP3R1P63098 170 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 MADCAM1Q13477 382 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 ZNF79Q15937 498 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.75■□□□□ 0.75
SIX3-201ENST00000260653 TMEM106AQ96A25 262 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 NABP1Q96AH0 204 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 NELFAQ9H3P2 528 aa19.75■□□□□ 0.75
SIX3-201ENST00000260653 MGAQ8IWI9 3026 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 GFRA3O60609 400 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 MSR1P21757 451 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 GUCA1AP43080 201 aaPredicted RBP19.74■□□□□ 0.75
SIX3-201ENST00000260653 MZT2AQ6P582 158 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 FOXL2NBQ6ZUU3 175 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 ALKBH3Q96Q83 286 aaPredicted RBP19.74■□□□□ 0.75
SIX3-201ENST00000260653 GFI1Q99684 422 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 LDAHQ9H6V9 325 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 BRD7Q9NPI1 651 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 PRELID1Q9Y255 219 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 RGS21Q2M5E4 152 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 ZNF544Q6NX49 715 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 FNDC9Q8TBE3 224 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 TSEN15Q8WW01 171 aaKnown RBP19.74■□□□□ 0.75
SIX3-201ENST00000260653 EXO5Q9H790 373 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 ZDHHC11Q9H8X9 412 aa19.74■□□□□ 0.75
SIX3-201ENST00000260653 NOTOA8MTQ0 251 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 ZNF878C9JN71 531 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 CEACAM4O75871 244 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 PAHP00439 452 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 EPXP11678 715 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 ATF1P18846 271 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 FAM131AQ6UXB0 335 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 ACOT12Q8WYK0 555 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 OR52A1Q9UKL2 312 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 RTTNQ86VV8 2226 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 SPENQ96T58 3664 aaKnown RBP19.73■□□□□ 0.75
SIX3-201ENST00000260653 TRBV5-7A0A0A0MS05 114 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 AZGP1P25311 298 aaKnown RBP19.73■□□□□ 0.75
SIX3-201ENST00000260653 PSMD7P51665 324 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 LSM6P62312 80 aaKnown RBP19.73■□□□□ 0.75
SIX3-201ENST00000260653 ENDOGQ14249 297 aaKnown RBP19.73■□□□□ 0.75
SIX3-201ENST00000260653 LRRC18Q8N456 261 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 CRLF2Q9HC73 371 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 PNRC2Q9NPJ4 139 aaKnown RBP19.73■□□□□ 0.75
SIX3-201ENST00000260653 FAM206AQ9NX38 181 aa19.73■□□□□ 0.75
SIX3-201ENST00000260653 TNRC6AQ8NDV7 1962 aaKnown RBP19.73■□□□□ 0.75
SIX3-201ENST00000260653 A0A0B4J203 849 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 ACTL6AO96019 429 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 MMP16P51512 607 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 BCL2A1Q16548 175 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 STEAP3Q658P3 488 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 CNIH2Q6PI25 160 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 ZNF433Q8N7K0 673 aaPredicted RBP19.72■□□□□ 0.75
SIX3-201ENST00000260653 KCTD12Q96CX2 325 aaKnown RBP19.72■□□□□ 0.75
SIX3-201ENST00000260653 SPRR3Q9UBC9 169 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 TRGV5A0A0B4J1U4 118 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 FABP12A6NFH5 140 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 SYNGR4O95473 234 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 ZNF12P17014 697 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 ZNF84P51523 738 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 ARPC4P59998 168 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 STAC2Q6ZMT1 411 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 LINGO2Q7L985 606 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 LYSMD2Q8IV50 215 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 TCF7L1Q9HCS4 588 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 C14orf119Q9NWQ9 140 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 MCTS1Q9ULC4 181 aaKnown RBP19.72■□□□□ 0.75
SIX3-201ENST00000260653 FREM1Q5H8C1 2179 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 ACACAQ13085 2346 aa19.72■□□□□ 0.75
SIX3-201ENST00000260653 BOD1L1Q8NFC6 3051 aa19.71■□□□□ 0.75
SIX3-201ENST00000260653 TRAV8-7A0A075B6U6 113 aa19.71■□□□□ 0.75
SIX3-201ENST00000260653 IGKV3D-15A0A087WSY6 115 aa19.71■□□□□ 0.75
SIX3-201ENST00000260653 KLHL24Q6TFL4 600 aa19.71■□□□□ 0.75
SIX3-201ENST00000260653 GPR137CQ8N3F9 429 aa19.71■□□□□ 0.75
SIX3-201ENST00000260653 ZCCHC4Q9H5U6 513 aa19.71■□□□□ 0.75
SIX3-201ENST00000260653 hCG_2014768A0A024R1R8 64 aa19.71■□□□□ 0.75
SIX3-201ENST00000260653 TFECO14948 347 aaPredicted RBP19.71■□□□□ 0.75
SIX3-201ENST00000260653 ZNF181Q2M3W8 571 aa19.71■□□□□ 0.75
SIX3-201ENST00000260653 BCL2L15Q5TBC7 163 aa19.71■□□□□ 0.75
SIX3-201ENST00000260653 TRMT10AQ8TBZ6 339 aaKnown RBP19.71■□□□□ 0.75
SIX3-201ENST00000260653 SRRQ9GZT4 340 aa19.71■□□□□ 0.75
SIX3-201ENST00000260653 MALT1Q9UDY8 824 aa19.71■□□□□ 0.75
SIX3-201ENST00000260653 TRAV17A0A0B4J275 112 aa19.7■□□□□ 0.74
SIX3-201ENST00000260653 ADRA2CP18825 462 aa19.7■□□□□ 0.74
SIX3-201ENST00000260653 HSD11B1P28845 292 aa19.7■□□□□ 0.74
SIX3-201ENST00000260653 SAMD12Q8N8I0 201 aa19.7■□□□□ 0.74
SIX3-201ENST00000260653 PAQR5Q9NXK6 330 aaPredicted RBP19.7■□□□□ 0.74
SIX3-201ENST00000260653 NOSIPQ9Y314 301 aaKnown RBP19.7■□□□□ 0.74
SIX3-201ENST00000260653 LOC107986453A0A1B0GWG9 222 aa19.7■□□□□ 0.74
SIX3-201ENST00000260653 RAF1P04049 648 aa19.7■□□□□ 0.74
SIX3-201ENST00000260653 ELK1P19419 428 aa19.7■□□□□ 0.74
SIX3-201ENST00000260653 DCTDP32321 178 aa19.7■□□□□ 0.74
SIX3-201ENST00000260653 MRPS34P82930 218 aaKnown RBP19.7■□□□□ 0.74
SIX3-201ENST00000260653 TAF13Q15543 124 aa19.7■□□□□ 0.74
SIX3-201ENST00000260653 DCDC5Q6ZRR9 648 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms